Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU147139 |
| length | 303 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G124556 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 691007 ~ 727883 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU147097 | lncRNA | upstream | 32449 | 605859 ~ 658558 (+) | False | cept1a |
| TU147109 | lncRNA | upstream | 32449 | 605859 ~ 658558 (+) | False | cept1a |
| TU147077 | lncRNA | upstream | 153847 | 515755 ~ 537160 (+) | True | G124514 |
| TU147082 | lncRNA | upstream | 173108 | 494892 ~ 517899 (+) | True | G124519 |
| TU147182 | lncRNA | downstream | 79307 | 807190 ~ 807845 (+) | False | dennd2da |
| TU147184 | lncRNA | downstream | 90939 | 818822 ~ 821340 (+) | False | dennd2da |
| TU147247 | lncRNA | downstream | 194736 | 922619 ~ 923124 (+) | True | G124643 |
| TU147586 | lncRNA | downstream | 266969 | 994852 ~ 995170 (+) | True | G124874 |
| TU147613 | lncRNA | downstream | 336718 | 1064601 ~ 1065080 (+) | True | G124895 |
| XM_034306576.1 | mRNA | upstream | 32444 | 651403 ~ 658563 (+) | True | cept1a |
| XM_026912303.2 | mRNA | upstream | 156008 | 515310 ~ 534999 (+) | True | LOC113525715 |
| XM_034306924.1 | mRNA | upstream | 182097 | 507064 ~ 508910 (+) | True | si:ch73-70k4.1 |
| XM_026938255.2 | mRNA | upstream | 196895 | 490445 ~ 494112 (+) | True | tnfsf10 |
| XM_026938098.2 | mRNA | upstream | 214461 | 472540 ~ 476546 (+) | False | LOC113541233 |
| XM_034306579.1 | mRNA | downstream | 31418 | 759301 ~ 777486 (+) | True | LOC117597816 |
| XM_034306580.1 | mRNA | downstream | 52198 | 780081 ~ 821367 (+) | True | dennd2da |
| XM_034306816.1 | mRNA | downstream | 212659 | 940542 ~ 960999 (+) | True | slc5a5 |
| XM_034306817.1 | mRNA | downstream | 212659 | 940542 ~ 957069 (+) | False | slc5a5 |
| XM_034306819.1 | mRNA | downstream | 219885 | 947768 ~ 960999 (+) | False | slc5a5 |
| TU147120 | other | upstream | 43054 | 645966 ~ 647953 (+) | True | G124541 |
| TU147121 | other | upstream | 43515 | 645966 ~ 647492 (+) | False | G124541 |
| TU147123 | other | upstream | 43515 | 645966 ~ 647492 (+) | False | G124541 |
| TU147085 | other | upstream | 182099 | 507095 ~ 508908 (+) | False | si:ch73-70k4.1 |
| TU147050 | other | upstream | 283573 | 399756 ~ 407434 (+) | True | G124498 |
| TU147176 | other | downstream | 50081 | 777964 ~ 816657 (+) | False | dennd2da |
| TU147174 | other | downstream | 52136 | 780019 ~ 803803 (+) | False | dennd2da |
| TU147173 | other | downstream | 64636 | 792519 ~ 816657 (+) | False | dennd2da |
| TU147636 | other | downstream | 375852 | 1103735 ~ 1106287 (+) | False | lonrf1l |
| TU147818 | other | downstream | 616453 | 1344336 ~ 1346585 (+) | True | G125062 |
