Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU147155 |
| length | 904 |
| RNA type | TUCP |
| GC content | 0.48 |
| exon number | 4 |
| gene id | G124565 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 704589 ~ 705857 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU147136 | lncRNA | upstream | 12343 | 687106 ~ 692246 (+) | True | G124553 |
| TU147097 | lncRNA | upstream | 46031 | 605859 ~ 658558 (+) | False | cept1a |
| TU147109 | lncRNA | upstream | 46031 | 605859 ~ 658558 (+) | False | cept1a |
| TU147077 | lncRNA | upstream | 167429 | 515755 ~ 537160 (+) | True | G124514 |
| TU147083 | lncRNA | upstream | 200797 | 503448 ~ 503792 (+) | True | G124520 |
| TU147182 | lncRNA | downstream | 101333 | 807190 ~ 807845 (+) | False | dennd2da |
| TU147184 | lncRNA | downstream | 112965 | 818822 ~ 821340 (+) | False | dennd2da |
| TU147247 | lncRNA | downstream | 216762 | 922619 ~ 923124 (+) | True | G124643 |
| TU147586 | lncRNA | downstream | 288995 | 994852 ~ 995170 (+) | True | G124874 |
| TU147613 | lncRNA | downstream | 358744 | 1064601 ~ 1065080 (+) | True | G124895 |
| XM_034306576.1 | mRNA | upstream | 46026 | 651403 ~ 658563 (+) | True | cept1a |
| XM_026912303.2 | mRNA | upstream | 169590 | 515310 ~ 534999 (+) | True | LOC113525715 |
| XM_034306924.1 | mRNA | upstream | 195679 | 507064 ~ 508910 (+) | True | si:ch73-70k4.1 |
| XM_026938255.2 | mRNA | upstream | 210477 | 490445 ~ 494112 (+) | True | tnfsf10 |
| XM_026938098.2 | mRNA | upstream | 228043 | 472540 ~ 476546 (+) | False | LOC113541233 |
| XM_034306319.1 | mRNA | downstream | 20935 | 726792 ~ 758536 (+) | True | spag17 |
| XM_034306320.1 | mRNA | downstream | 20935 | 726792 ~ 758536 (+) | False | spag17 |
| XM_034306579.1 | mRNA | downstream | 53444 | 759301 ~ 777486 (+) | True | LOC117597816 |
| XM_034306580.1 | mRNA | downstream | 74224 | 780081 ~ 821367 (+) | True | dennd2da |
| XM_034306816.1 | mRNA | downstream | 234685 | 940542 ~ 960999 (+) | True | slc5a5 |
| TU147120 | other | upstream | 56636 | 645966 ~ 647953 (+) | True | G124541 |
| TU147121 | other | upstream | 57097 | 645966 ~ 647492 (+) | False | G124541 |
| TU147123 | other | upstream | 57097 | 645966 ~ 647492 (+) | False | G124541 |
| TU147085 | other | upstream | 195681 | 507095 ~ 508908 (+) | False | si:ch73-70k4.1 |
| TU147050 | other | upstream | 297155 | 399756 ~ 407434 (+) | True | G124498 |
| TU147176 | other | downstream | 72107 | 777964 ~ 816657 (+) | False | dennd2da |
| TU147174 | other | downstream | 74162 | 780019 ~ 803803 (+) | False | dennd2da |
| TU147173 | other | downstream | 86662 | 792519 ~ 816657 (+) | False | dennd2da |
| TU147636 | other | downstream | 397878 | 1103735 ~ 1106287 (+) | False | lonrf1l |
| TU147818 | other | downstream | 638479 | 1344336 ~ 1346585 (+) | True | G125062 |
