Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU147182 |
| length | 211 |
| lncRNA type | sense_over |
| GC content | 0.54 |
| exon number | 2 |
| gene id | dennd2da |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 777964 ~ 821367 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU147139 | lncRNA | upstream | 79307 | 691007 ~ 727883 (+) | True | G124556 |
| TU147136 | lncRNA | upstream | 114944 | 687106 ~ 692246 (+) | True | G124553 |
| TU147097 | lncRNA | upstream | 148632 | 605859 ~ 658558 (+) | False | cept1a |
| TU147109 | lncRNA | upstream | 148632 | 605859 ~ 658558 (+) | False | cept1a |
| TU147077 | lncRNA | upstream | 270030 | 515755 ~ 537160 (+) | True | G124514 |
| TU147184 | lncRNA | downstream | 10977 | 818822 ~ 821340 (+) | False | dennd2da |
| TU147247 | lncRNA | downstream | 114774 | 922619 ~ 923124 (+) | True | G124643 |
| TU147586 | lncRNA | downstream | 187007 | 994852 ~ 995170 (+) | True | G124874 |
| TU147613 | lncRNA | downstream | 256756 | 1064601 ~ 1065080 (+) | True | G124895 |
| TU147640 | lncRNA | downstream | 305209 | 1113054 ~ 1114384 (+) | True | G124918 |
| XM_034306579.1 | mRNA | upstream | 29704 | 759301 ~ 777486 (+) | True | LOC117597816 |
| XM_034306319.1 | mRNA | upstream | 48654 | 726792 ~ 758536 (+) | True | spag17 |
| XM_034306320.1 | mRNA | upstream | 48654 | 726792 ~ 758536 (+) | False | spag17 |
| XM_034306576.1 | mRNA | upstream | 148627 | 651403 ~ 658563 (+) | True | cept1a |
| XM_026912303.2 | mRNA | upstream | 272191 | 515310 ~ 534999 (+) | True | LOC113525715 |
| XM_034306816.1 | mRNA | downstream | 132697 | 940542 ~ 960999 (+) | True | slc5a5 |
| XM_034306817.1 | mRNA | downstream | 132697 | 940542 ~ 957069 (+) | False | slc5a5 |
| XM_034306819.1 | mRNA | downstream | 139923 | 947768 ~ 960999 (+) | False | slc5a5 |
| XM_034306818.1 | mRNA | downstream | 141148 | 948993 ~ 960999 (+) | False | slc5a5 |
| XM_026911599.2 | mRNA | downstream | 157653 | 965498 ~ 994785 (+) | True | jak3 |
| TU147174 | other | upstream | 3387 | 780019 ~ 803803 (+) | False | dennd2da |
| TU147149 | other | upstream | 101333 | 704589 ~ 705857 (+) | True | G124565 |
| TU147151 | other | upstream | 101333 | 704589 ~ 705857 (+) | False | G124565 |
| TU147152 | other | upstream | 101333 | 704589 ~ 705857 (+) | False | G124565 |
| TU147155 | other | upstream | 101333 | 704589 ~ 705857 (+) | False | G124565 |
| TU147636 | other | downstream | 295890 | 1103735 ~ 1106287 (+) | False | lonrf1l |
| TU147818 | other | downstream | 536491 | 1344336 ~ 1346585 (+) | True | G125062 |
| TU147915 | other | downstream | 995652 | 1803497 ~ 1806790 (+) | True | si:ch211-229n2.7 |
| TU147950 | other | downstream | 1069196 | 1877041 ~ 1931418 (+) | False | LOC113535242 |
| XR_003403572.2 | other | downstream | 1408257 | 2216102 ~ 2232140 (+) | False | alkal1 |
