Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU147886 |
| length | 505 |
| lncRNA type | inter_gene |
| GC content | 0.57 |
| exon number | 2 |
| gene id | G125117 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 1621257 ~ 1623005 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU147885 | lncRNA | upstream | 2387 | 1617620 ~ 1618870 (+) | True | G125116 |
| TU147866 | lncRNA | upstream | 28364 | 1543836 ~ 1592893 (+) | False | G125098 |
| TU147867 | lncRNA | upstream | 28364 | 1545694 ~ 1592893 (+) | False | G125098 |
| TU147865 | lncRNA | upstream | 28364 | 1591983 ~ 1592893 (+) | True | G125098 |
| TU147856 | lncRNA | upstream | 113982 | 1505026 ~ 1507275 (+) | True | G125089 |
| TU147893 | lncRNA | downstream | 63314 | 1686319 ~ 1696261 (+) | True | G125119 |
| TU147909 | lncRNA | downstream | 139299 | 1762304 ~ 1763325 (+) | False | G125129 |
| TU147910 | lncRNA | downstream | 139299 | 1762304 ~ 1763325 (+) | True | G125129 |
| TU147928 | lncRNA | downstream | 188349 | 1811354 ~ 1813285 (+) | True | G125144 |
| TU148000 | lncRNA | downstream | 337599 | 1960604 ~ 1993404 (+) | True | G125208 |
| XM_034306820.1 | mRNA | upstream | 40530 | 1562749 ~ 1580727 (+) | True | lhx4 |
| XM_034306746.1 | mRNA | upstream | 82403 | 1515223 ~ 1538854 (+) | True | qsox1 |
| XM_034306742.1 | mRNA | upstream | 119868 | 1475101 ~ 1501389 (+) | False | cep350 |
| XM_034306566.1 | mRNA | downstream | 5073 | 1628078 ~ 1693853 (+) | True | xpr1a |
| XM_034306844.1 | mRNA | downstream | 77983 | 1700988 ~ 1726361 (+) | True | sin3b |
| XM_034306302.1 | mRNA | downstream | 103803 | 1726808 ~ 1753281 (+) | True | def6a |
| XM_034306303.1 | mRNA | downstream | 103854 | 1726859 ~ 1753281 (+) | False | def6a |
| XM_026928023.2 | mRNA | downstream | 132520 | 1755525 ~ 1759336 (+) | True | ndufb11 |
| TU147818 | other | upstream | 274672 | 1344336 ~ 1346585 (+) | True | G125062 |
| TU147636 | other | upstream | 514970 | 1103735 ~ 1106287 (+) | False | lonrf1l |
| TU147176 | other | upstream | 804600 | 777964 ~ 816657 (+) | False | dennd2da |
| TU147915 | other | downstream | 180492 | 1803497 ~ 1806790 (+) | True | si:ch211-229n2.7 |
| TU147950 | other | downstream | 254036 | 1877041 ~ 1931418 (+) | False | LOC113535242 |
| XR_003403572.2 | other | downstream | 593097 | 2216102 ~ 2232140 (+) | False | alkal1 |
| XR_004578620.1 | other | downstream | 2472264 | 4095269 ~ 4101689 (+) | False | si:ch73-233m11.2 |
| TU149628 | other | downstream | 2597679 | 4220684 ~ 4278077 (+) | False | ssuh2rs1 |
