Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU148482 |
| length | 262 |
| lncRNA type | read_through |
| GC content | 0.29 |
| exon number | 2 |
| gene id | G125626 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 2993850 ~ 3227664 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU148427 | lncRNA | upstream | 81466 | 2875322 ~ 2912384 (+) | False | LOC113535041 |
| TU148431 | lncRNA | upstream | 116704 | 2845709 ~ 2877146 (+) | False | LOC113535041 |
| TU148429 | lncRNA | upstream | 116704 | 2848899 ~ 2877146 (+) | False | LOC113535041 |
| TU148442 | lncRNA | upstream | 138075 | 2854757 ~ 2855775 (+) | True | G125593 |
| TU148365 | lncRNA | upstream | 251566 | 2741998 ~ 2742284 (+) | True | G125525 |
| TU148573 | lncRNA | downstream | 108757 | 3336421 ~ 3338476 (+) | False | znf692 |
| TU148612 | lncRNA | downstream | 217351 | 3445015 ~ 3458860 (+) | False | acsbg2 |
| TU148610 | lncRNA | downstream | 227653 | 3455317 ~ 3477053 (+) | False | acsbg2 |
| TU148607 | lncRNA | downstream | 248657 | 3476321 ~ 3491140 (+) | False | acsbg2 |
| TU148609 | lncRNA | downstream | 248657 | 3476321 ~ 3537289 (+) | False | acsbg2 |
| XM_026928605.2 | mRNA | upstream | 67518 | 2920866 ~ 2926332 (+) | True | sec22bb |
| XM_026928606.2 | mRNA | upstream | 67518 | 2920867 ~ 2926332 (+) | False | sec22bb |
| XM_034306258.1 | mRNA | upstream | 75619 | 2911721 ~ 2918231 (+) | False | LOC113535041 |
| XM_026928128.2 | mRNA | upstream | 75619 | 2911721 ~ 2918231 (+) | False | LOC113535041 |
| XM_026928127.2 | mRNA | upstream | 75619 | 2911950 ~ 2918231 (+) | True | LOC113535041 |
| XM_026927946.2 | mRNA | downstream | 108716 | 3336380 ~ 3347747 (+) | True | znf692 |
| XM_026927947.2 | mRNA | downstream | 108716 | 3336380 ~ 3347747 (+) | False | znf692 |
| XM_026927948.2 | mRNA | downstream | 108717 | 3336381 ~ 3347747 (+) | False | znf692 |
| XM_026927949.2 | mRNA | downstream | 108717 | 3336381 ~ 3347747 (+) | False | znf692 |
| XM_034306435.1 | mRNA | downstream | 122148 | 3349812 ~ 3399427 (+) | False | fcho1 |
| XR_003403572.2 | other | upstream | 761710 | 2216102 ~ 2232140 (+) | False | alkal1 |
| TU147950 | other | upstream | 1062432 | 1877041 ~ 1931418 (+) | False | LOC113535242 |
| TU147915 | other | upstream | 1187060 | 1803497 ~ 1806790 (+) | True | si:ch211-229n2.7 |
| TU147818 | other | upstream | 1647265 | 1344336 ~ 1346585 (+) | True | G125062 |
| TU147636 | other | upstream | 1887563 | 1103735 ~ 1106287 (+) | False | lonrf1l |
| XR_004578620.1 | other | downstream | 867605 | 4095269 ~ 4101689 (+) | False | si:ch73-233m11.2 |
| TU149628 | other | downstream | 993020 | 4220684 ~ 4278077 (+) | False | ssuh2rs1 |
| XR_004578621.1 | other | downstream | 1515575 | 4743239 ~ 4762991 (+) | False | srpk3 |
| XR_004578572.1 | other | downstream | 3529099 | 6756763 ~ 6805310 (+) | False | phf19 |
| XR_004578571.1 | other | downstream | 3529099 | 6756763 ~ 6796076 (+) | False | phf19 |
