Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU152171 |
| length | 919 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G128811 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 7833516 ~ 7834658 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| ko00310 | Lysine degradation |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU152165 | lncRNA | upstream | 8407 | 7824843 ~ 7825109 (+) | True | G128805 |
| TU152155 | lncRNA | upstream | 16427 | 7816357 ~ 7817089 (+) | True | G128798 |
| TU152152 | lncRNA | upstream | 19662 | 7813655 ~ 7813854 (+) | True | G128795 |
| TU152104 | lncRNA | upstream | 63148 | 7769090 ~ 7770368 (+) | True | G128768 |
| TU152097 | lncRNA | upstream | 64771 | 7752134 ~ 7768745 (+) | True | G128761 |
| TU152125 | lncRNA | downstream | 7875 | 7842533 ~ 7846157 (+) | True | G128777 |
| TU152143 | lncRNA | downstream | 21346 | 7856004 ~ 7861511 (+) | True | smim1 |
| TU152139 | lncRNA | downstream | 23196 | 7857854 ~ 7861511 (+) | False | smim1 |
| TU152140 | lncRNA | downstream | 23196 | 7857854 ~ 7861511 (+) | False | smim1 |
| TU152183 | lncRNA | downstream | 68842 | 7903500 ~ 7904383 (+) | True | G128823 |
| XM_026928502.2 | mRNA | upstream | 136947 | 7694733 ~ 7696569 (+) | True | LOC113535261 |
| XM_026928361.2 | mRNA | upstream | 146178 | 7684995 ~ 7687338 (+) | True | ndufaf2 |
| XM_026928230.2 | mRNA | upstream | 341451 | 7483745 ~ 7492065 (+) | False | rab3c |
| XM_026916283.2 | mRNA | downstream | 21853 | 7856511 ~ 7861570 (+) | False | smim1 |
| XM_026916265.2 | mRNA | downstream | 23045 | 7857703 ~ 7861570 (+) | False | smim1 |
| XM_026916274.2 | mRNA | downstream | 23417 | 7858075 ~ 7861570 (+) | False | smim1 |
| XM_026928478.2 | mRNA | downstream | 38735 | 7873393 ~ 7909722 (+) | True | cep104 |
| XM_034306638.1 | mRNA | downstream | 38735 | 7873393 ~ 7909722 (+) | False | cep104 |
| TU151932 | other | upstream | 402519 | 7424023 ~ 7430997 (+) | True | mrps36 |
| TU151927 | other | upstream | 405959 | 7424023 ~ 7427557 (+) | False | mrps36 |
| XR_004578572.1 | other | upstream | 1028206 | 6756763 ~ 6805310 (+) | False | phf19 |
| XR_004578571.1 | other | upstream | 1037440 | 6756763 ~ 6796076 (+) | False | phf19 |
| XR_004578621.1 | other | upstream | 3070525 | 4743239 ~ 4762991 (+) | False | srpk3 |
| TU152202 | other | downstream | 133577 | 7968235 ~ 7971749 (+) | True | LOC113526371 |
| TU152708 | other | downstream | 472506 | 8307164 ~ 8312656 (+) | True | G129247 |
| TU153960 | other | downstream | 2523288 | 10357946 ~ 10358315 (+) | True | G130390 |
| TU153993 | other | downstream | 2721860 | 10556518 ~ 10563561 (+) | True | zmynd12 |
| TU154218 | other | downstream | 3035476 | 10870134 ~ 10874017 (+) | False | mrpl55 |
