Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU152183 |
| length | 859 |
| lncRNA type | intronic |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G128823 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 7903500 ~ 7904383 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU152143 | lncRNA | upstream | 41989 | 7856004 ~ 7861511 (+) | True | smim1 |
| TU152139 | lncRNA | upstream | 41989 | 7857854 ~ 7861511 (+) | False | smim1 |
| TU152140 | lncRNA | upstream | 41989 | 7857854 ~ 7861511 (+) | False | smim1 |
| TU152125 | lncRNA | upstream | 57343 | 7842533 ~ 7846157 (+) | True | G128777 |
| TU152171 | lncRNA | upstream | 68842 | 7833516 ~ 7834658 (+) | True | G128811 |
| TU152117 | lncRNA | downstream | 23183 | 7927566 ~ 7929704 (+) | False | G128775 |
| TU152119 | lncRNA | downstream | 23183 | 7927566 ~ 7929704 (+) | True | G128775 |
| XR_003402768.2 | lncRNA | downstream | 63896 | 7968279 ~ 7970772 (+) | False | LOC113526371 |
| TU152198 | lncRNA | downstream | 67971 | 7972354 ~ 7998833 (+) | True | G128837 |
| TU152220 | lncRNA | downstream | 75261 | 7979644 ~ 7994612 (+) | True | G128851 |
| XM_026916283.2 | mRNA | upstream | 41930 | 7856511 ~ 7861570 (+) | False | smim1 |
| XM_026916265.2 | mRNA | upstream | 41930 | 7857703 ~ 7861570 (+) | False | smim1 |
| XM_026916274.2 | mRNA | upstream | 41930 | 7858075 ~ 7861570 (+) | False | smim1 |
| XM_026928502.2 | mRNA | upstream | 206931 | 7694733 ~ 7696569 (+) | True | LOC113535261 |
| XM_026928361.2 | mRNA | upstream | 216162 | 7684995 ~ 7687338 (+) | True | ndufaf2 |
| XM_034306604.1 | mRNA | downstream | 12383 | 7916766 ~ 7921741 (+) | True | c8h1orf174 |
| XM_034306715.1 | mRNA | downstream | 50340 | 7954723 ~ 7959217 (+) | True | si:dkey-20d21.12 |
| XM_026916892.2 | mRNA | downstream | 213194 | 8117577 ~ 8122886 (+) | True | LOC113528372 |
| XM_026914400.2 | mRNA | downstream | 394972 | 8299355 ~ 8301673 (+) | True | si:dkey-72l14.3 |
| XM_026926795.2 | mRNA | downstream | 490606 | 8394989 ~ 8402547 (+) | True | LOC113534163 |
| TU151932 | other | upstream | 472503 | 7424023 ~ 7430997 (+) | True | mrps36 |
| TU151927 | other | upstream | 475943 | 7424023 ~ 7427557 (+) | False | mrps36 |
| XR_004578572.1 | other | upstream | 1098190 | 6756763 ~ 6805310 (+) | False | phf19 |
| XR_004578571.1 | other | upstream | 1107424 | 6756763 ~ 6796076 (+) | False | phf19 |
| XR_004578621.1 | other | upstream | 3140509 | 4743239 ~ 4762991 (+) | False | srpk3 |
| TU152202 | other | downstream | 63852 | 7968235 ~ 7971749 (+) | True | LOC113526371 |
| TU152708 | other | downstream | 402781 | 8307164 ~ 8312656 (+) | True | G129247 |
| TU153960 | other | downstream | 2453563 | 10357946 ~ 10358315 (+) | True | G130390 |
| TU153993 | other | downstream | 2652135 | 10556518 ~ 10563561 (+) | True | zmynd12 |
| TU154218 | other | downstream | 2965751 | 10870134 ~ 10874017 (+) | False | mrpl55 |
