Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU153191 |
| length | 979 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G129704 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 9112784 ~ 9123869 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU153100 | lncRNA | upstream | 106000 | 9003469 ~ 9006784 (+) | True | G129621 |
| TU153099 | lncRNA | upstream | 106231 | 9003469 ~ 9006553 (+) | False | G129621 |
| TU152913 | lncRNA | upstream | 386896 | 8725452 ~ 8725888 (+) | True | G129439 |
| TU152914 | lncRNA | upstream | 388714 | 8723664 ~ 8724070 (+) | True | G129440 |
| XR_004578601.1 | lncRNA | upstream | 395552 | 8679642 ~ 8717232 (+) | False | LOC117597837 |
| TU153299 | lncRNA | downstream | 185634 | 9309503 ~ 9312451 (+) | True | G129805 |
| TU153298 | lncRNA | downstream | 187821 | 9311690 ~ 9312451 (+) | False | G129805 |
| TU153327 | lncRNA | downstream | 200839 | 9324708 ~ 9337950 (+) | True | G129831 |
| TU153354 | lncRNA | downstream | 326693 | 9450562 ~ 9495730 (+) | True | G129849 |
| TU153355 | lncRNA | downstream | 329165 | 9453034 ~ 9454409 (+) | True | G129850 |
| XM_026916436.2 | mRNA | upstream | 109960 | 8950214 ~ 9002824 (+) | True | sema3b |
| XM_026916445.2 | mRNA | upstream | 109960 | 8950214 ~ 9002824 (+) | False | sema3b |
| XM_034306645.1 | mRNA | upstream | 109960 | 8950992 ~ 9002824 (+) | False | sema3b |
| XM_026925547.2 | mRNA | upstream | 196973 | 8902248 ~ 8915811 (+) | True | LOC113533404 |
| XM_034306375.1 | mRNA | upstream | 571358 | 8483083 ~ 8541426 (+) | False | ajap1 |
| XM_026938816.2 | mRNA | downstream | 42109 | 9165978 ~ 9169576 (+) | True | pym1 |
| XM_026914409.2 | mRNA | downstream | 51230 | 9175099 ~ 9180830 (+) | True | LOC113526950 |
| XM_026914420.2 | mRNA | downstream | 170511 | 9294380 ~ 9295483 (+) | True | mc3r |
| XM_026929048.2 | mRNA | downstream | 345761 | 9469630 ~ 9471279 (+) | True | cebpb |
| XM_026922619.2 | mRNA | downstream | 387070 | 9510939 ~ 9519258 (+) | True | adipor1b |
| TU152708 | other | upstream | 800128 | 8307164 ~ 8312656 (+) | True | G129247 |
| TU152202 | other | upstream | 1141035 | 7968235 ~ 7971749 (+) | True | LOC113526371 |
| TU151932 | other | upstream | 1681787 | 7424023 ~ 7430997 (+) | True | mrps36 |
| TU151927 | other | upstream | 1685227 | 7424023 ~ 7427557 (+) | False | mrps36 |
| XR_004578571.1 | other | upstream | 2316708 | 6756763 ~ 6796076 (+) | False | phf19 |
| TU153960 | other | downstream | 1234077 | 10357946 ~ 10358315 (+) | True | G130390 |
| TU153993 | other | downstream | 1432649 | 10556518 ~ 10563561 (+) | True | zmynd12 |
| TU154218 | other | downstream | 1746265 | 10870134 ~ 10874017 (+) | False | mrpl55 |
| XR_003403321.2 | other | downstream | 2498433 | 11622302 ~ 11633844 (+) | False | LOC113530800 |
| XR_003403311.2 | other | downstream | 2498441 | 11622310 ~ 11633844 (+) | True | LOC113530800 |
