Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU160034 |
| length | 1304 |
| lncRNA type | read_through |
| GC content | 0.35 |
| exon number | 2 |
| gene id | LOC113533656 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 19825798 ~ 19902367 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU160018 | lncRNA | upstream | 126966 | 19716637 ~ 19716979 (+) | True | G135466 |
| TU159931 | lncRNA | upstream | 139478 | 19704262 ~ 19704467 (+) | True | G135393 |
| TU159885 | lncRNA | upstream | 145206 | 19625304 ~ 19698739 (+) | True | G135353 |
| TU159884 | lncRNA | upstream | 216117 | 19619315 ~ 19627828 (+) | True | G135352 |
| TU159898 | lncRNA | upstream | 228288 | 19614875 ~ 19615657 (+) | True | G135363 |
| TU160085 | lncRNA | downstream | 102752 | 20005119 ~ 20005708 (+) | True | G135524 |
| TU160219 | lncRNA | downstream | 110200 | 20012567 ~ 20012767 (+) | True | G135641 |
| TU160221 | lncRNA | downstream | 112155 | 20014522 ~ 20014770 (+) | True | G135643 |
| TU160256 | lncRNA | downstream | 278426 | 20180793 ~ 20185546 (+) | False | LOC113533164 |
| TU160652 | lncRNA | downstream | 1034756 | 20937123 ~ 20939070 (+) | True | G136057 |
| XM_026925230.2 | mRNA | upstream | 88299 | 19730623 ~ 19755646 (+) | True | bpifcl |
| XM_026925229.2 | mRNA | upstream | 88299 | 19734876 ~ 19755646 (+) | False | bpifcl |
| XM_026925232.2 | mRNA | upstream | 88299 | 19739048 ~ 19755646 (+) | False | bpifcl |
| XM_026925231.2 | mRNA | upstream | 88299 | 19739054 ~ 19755646 (+) | False | bpifcl |
| XM_026925225.2 | mRNA | upstream | 113421 | 19724022 ~ 19730524 (+) | True | LOC113533240 |
| XM_026925094.2 | mRNA | downstream | 29012 | 19931379 ~ 19939003 (+) | True | LOC113533168 |
| XM_026925086.2 | mRNA | downstream | 148742 | 20051109 ~ 20171369 (+) | True | bsna |
| XM_026925089.2 | mRNA | downstream | 278401 | 20180768 ~ 20185618 (+) | True | LOC113533164 |
| XM_034306640.1 | mRNA | downstream | 286433 | 20188800 ~ 20209345 (+) | True | LOC113533362 |
| XM_026925026.2 | mRNA | downstream | 307389 | 20209756 ~ 20215905 (+) | True | tlr9 |
| TU159806 | other | upstream | 341302 | 19487487 ~ 19502643 (+) | True | G135287 |
| TU159255 | other | upstream | 1382011 | 18436210 ~ 18461934 (+) | False | pbx3b |
| XR_003403426.2 | other | upstream | 1795056 | 18030975 ~ 18048889 (+) | True | vdac3 |
| TU158711 | other | upstream | 2547062 | 17296111 ~ 17296883 (+) | True | G134341 |
| XR_003402556.2 | other | upstream | 3108610 | 16716133 ~ 16735335 (+) | False | bicdl1 |
| XR_004578531.1 | other | downstream | 320048 | 20222415 ~ 20442191 (+) | True | LOC113533440 |
| XR_004578533.1 | other | downstream | 320048 | 20222415 ~ 20442191 (+) | False | LOC113533440 |
| XR_004578532.1 | other | downstream | 320048 | 20222415 ~ 20442191 (+) | False | LOC113533440 |
| XR_004578534.1 | other | downstream | 320048 | 20222415 ~ 20442191 (+) | False | LOC113533440 |
| XR_004578535.1 | other | downstream | 320048 | 20222415 ~ 20442191 (+) | False | LOC113533440 |
