Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU161897 |
| length | 263 |
| lncRNA type | inter_gene |
| GC content | 0.56 |
| exon number | 1 |
| gene id | G137086 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 22466767 ~ 22467029 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU161862 | lncRNA | upstream | 159152 | 22304729 ~ 22307615 (+) | True | G137057 |
| TU161800 | lncRNA | upstream | 316990 | 22148623 ~ 22149777 (+) | True | G137017 |
| TU161753 | lncRNA | upstream | 343016 | 22092595 ~ 22123751 (+) | False | LOC113533283 |
| TU161242 | lncRNA | upstream | 607099 | 21843187 ~ 21859668 (+) | False | LOC113533434 |
| TU161246 | lncRNA | upstream | 626915 | 21839632 ~ 21839852 (+) | True | G136544 |
| TU161898 | lncRNA | downstream | 1605 | 22468634 ~ 22468839 (+) | True | G137087 |
| TU161899 | lncRNA | downstream | 4012 | 22471041 ~ 22471330 (+) | True | G137088 |
| TU162067 | lncRNA | downstream | 42182 | 22509211 ~ 22509494 (+) | False | LOC113533405 |
| TU162068 | lncRNA | downstream | 43876 | 22510905 ~ 22511176 (+) | True | G137229 |
| TU162073 | lncRNA | downstream | 125204 | 22592233 ~ 22593268 (+) | True | G137232 |
| XM_026925258.2 | mRNA | upstream | 50192 | 22411193 ~ 22416575 (+) | True | ybx1 |
| XM_026925660.2 | mRNA | upstream | 56963 | 22377928 ~ 22409804 (+) | True | ppih |
| XM_026925730.2 | mRNA | upstream | 90302 | 22360790 ~ 22376465 (+) | True | exosc10 |
| XM_034306526.1 | mRNA | upstream | 107719 | 22267058 ~ 22359048 (+) | True | mtor |
| XM_026925220.2 | mRNA | upstream | 107719 | 22267058 ~ 22359048 (+) | False | mtor |
| XM_026925823.2 | mRNA | downstream | 30729 | 22497758 ~ 22499212 (+) | True | hes2.1 |
| XM_026925544.2 | mRNA | downstream | 40597 | 22507626 ~ 22509409 (+) | True | LOC113533405 |
| XM_026925541.2 | mRNA | downstream | 45043 | 22512072 ~ 22583841 (+) | False | acot7 |
| XM_026925542.2 | mRNA | downstream | 45971 | 22513000 ~ 22583841 (+) | True | acot7 |
| XM_026925543.2 | mRNA | downstream | 53466 | 22520495 ~ 22583841 (+) | False | acot7 |
| trnaa-ugc_5 | other | upstream | 776275 | 21690421 ~ 21690492 (+) | True | trnaa-ugc_5 |
| trnaa-ugc_4 | other | upstream | 776671 | 21690025 ~ 21690096 (+) | True | trnaa-ugc_4 |
| trnat-cgu_3 | other | upstream | 777029 | 21689667 ~ 21689738 (+) | True | trnat-cgu_3 |
| trnaa-ugc_3 | other | upstream | 778176 | 21688520 ~ 21688591 (+) | True | trnaa-ugc_3 |
| trnaa-ugc_2 | other | upstream | 778572 | 21688124 ~ 21688195 (+) | True | trnaa-ugc_2 |
| XR_004578647.1 | other | downstream | 781319 | 23248348 ~ 23259453 (+) | False | tprg1l |
| XR_004578528.1 | other | downstream | 1047557 | 23514586 ~ 23523976 (+) | False | pabpc1l |
| TU162995 | other | downstream | 1283388 | 23750417 ~ 23757114 (+) | True | G138010 |
| TU163200 | other | downstream | 1544588 | 24011617 ~ 24013726 (+) | False | fkbp1aa |
| TU163201 | other | downstream | 1544588 | 24011617 ~ 24013726 (+) | False | fkbp1aa |
