Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU162068 |
| length | 272 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G137229 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 22510905 ~ 22511176 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU162067 | lncRNA | upstream | 1411 | 22509211 ~ 22509494 (+) | False | LOC113533405 |
| TU161899 | lncRNA | upstream | 39575 | 22471041 ~ 22471330 (+) | True | G137088 |
| TU161898 | lncRNA | upstream | 42066 | 22468634 ~ 22468839 (+) | True | G137087 |
| TU161897 | lncRNA | upstream | 43876 | 22466767 ~ 22467029 (+) | True | G137086 |
| TU161862 | lncRNA | upstream | 203290 | 22304729 ~ 22307615 (+) | True | G137057 |
| TU162073 | lncRNA | downstream | 81057 | 22592233 ~ 22593268 (+) | True | G137232 |
| TU162078 | lncRNA | downstream | 124488 | 22635664 ~ 22636989 (+) | False | LOC113533432 |
| TU162079 | lncRNA | downstream | 124488 | 22635664 ~ 22636887 (+) | False | LOC113533432 |
| TU162220 | lncRNA | downstream | 170689 | 22681865 ~ 22684031 (+) | True | G137371 |
| TU162259 | lncRNA | downstream | 213986 | 22725162 ~ 22730142 (+) | True | G137401 |
| XM_026925544.2 | mRNA | upstream | 1496 | 22507626 ~ 22509409 (+) | True | LOC113533405 |
| XM_026925823.2 | mRNA | upstream | 11693 | 22497758 ~ 22499212 (+) | True | hes2.1 |
| XM_026925258.2 | mRNA | upstream | 94330 | 22411193 ~ 22416575 (+) | True | ybx1 |
| XM_026925660.2 | mRNA | upstream | 101101 | 22377928 ~ 22409804 (+) | True | ppih |
| XM_026925730.2 | mRNA | upstream | 134440 | 22360790 ~ 22376465 (+) | True | exosc10 |
| XM_026925541.2 | mRNA | downstream | 896 | 22512072 ~ 22583841 (+) | False | acot7 |
| XM_026925542.2 | mRNA | downstream | 1824 | 22513000 ~ 22583841 (+) | True | acot7 |
| XM_026925543.2 | mRNA | downstream | 9319 | 22520495 ~ 22583841 (+) | False | acot7 |
| XM_034306780.1 | mRNA | downstream | 83358 | 22594534 ~ 22636974 (+) | False | LOC113533432 |
| XM_026925582.2 | mRNA | downstream | 83359 | 22594535 ~ 22636974 (+) | True | LOC113533432 |
| trnaa-ugc_5 | other | upstream | 820413 | 21690421 ~ 21690492 (+) | True | trnaa-ugc_5 |
| trnaa-ugc_4 | other | upstream | 820809 | 21690025 ~ 21690096 (+) | True | trnaa-ugc_4 |
| trnat-cgu_3 | other | upstream | 821167 | 21689667 ~ 21689738 (+) | True | trnat-cgu_3 |
| trnaa-ugc_3 | other | upstream | 822314 | 21688520 ~ 21688591 (+) | True | trnaa-ugc_3 |
| trnaa-ugc_2 | other | upstream | 822710 | 21688124 ~ 21688195 (+) | True | trnaa-ugc_2 |
| XR_004578647.1 | other | downstream | 737172 | 23248348 ~ 23259453 (+) | False | tprg1l |
| XR_004578528.1 | other | downstream | 1003410 | 23514586 ~ 23523976 (+) | False | pabpc1l |
| TU162995 | other | downstream | 1239241 | 23750417 ~ 23757114 (+) | True | G138010 |
| TU163200 | other | downstream | 1500441 | 24011617 ~ 24013726 (+) | False | fkbp1aa |
| TU163201 | other | downstream | 1500441 | 24011617 ~ 24013726 (+) | False | fkbp1aa |
