Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU164394 |
| length | 570 |
| RNA type | TUCP |
| GC content | 0.41 |
| exon number | 4 |
| gene id | LOC117597866 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 25909575 ~ 25916807 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU164350 | lncRNA | upstream | 94534 | 25810175 ~ 25815041 (+) | True | G139172 |
| TU164343 | lncRNA | upstream | 226484 | 25672518 ~ 25683091 (+) | True | G139166 |
| TU164300 | lncRNA | upstream | 350910 | 25557340 ~ 25558665 (+) | False | egr3 |
| TU164115 | lncRNA | upstream | 457998 | 25448615 ~ 25451577 (+) | True | G138961 |
| XR_004578605.1 | lncRNA | upstream | 481387 | 25421054 ~ 25428188 (+) | True | LOC117597843 |
| XR_004578613.1 | lncRNA | downstream | 32051 | 25948849 ~ 25950449 (+) | True | LOC113546140 |
| TU164434 | lncRNA | downstream | 115796 | 26032594 ~ 26036133 (+) | True | G139235 |
| TU164785 | lncRNA | downstream | 483393 | 26400191 ~ 26423694 (+) | True | car15 |
| TU164826 | lncRNA | downstream | 596094 | 26512892 ~ 26519482 (+) | True | G139551 |
| TU164945 | lncRNA | downstream | 961838 | 26878636 ~ 26899417 (+) | True | G139647 |
| XM_026925905.2 | mRNA | upstream | 105133 | 25762965 ~ 25804442 (+) | True | disp3 |
| XM_026925535.2 | mRNA | upstream | 206450 | 25686205 ~ 25703125 (+) | True | si:dkey-32e23.4 |
| XM_026925537.2 | mRNA | upstream | 206450 | 25686205 ~ 25703125 (+) | False | si:dkey-32e23.4 |
| XM_026925536.2 | mRNA | upstream | 206450 | 25688432 ~ 25703125 (+) | False | si:dkey-32e23.4 |
| XM_026925224.2 | mRNA | upstream | 237675 | 25666925 ~ 25671900 (+) | True | ubl4a |
| XM_034306338.1 | mRNA | downstream | 949 | 25917747 ~ 25919263 (+) | False | LOC113537824 |
| XM_034306337.1 | mRNA | downstream | 950 | 25917748 ~ 25919263 (+) | True | LOC113537824 |
| XM_034306339.1 | mRNA | downstream | 951 | 25917749 ~ 25919263 (+) | False | LOC113537824 |
| XM_026945897.2 | mRNA | downstream | 21848 | 25938646 ~ 25940631 (+) | True | LOC117595683 |
| XM_026945872.2 | mRNA | downstream | 36169 | 25952967 ~ 25989162 (+) | True | antxr1a |
| trnae-cuc_21 | other | upstream | 637895 | 25271609 ~ 25271680 (+) | True | trnae-cuc_21 |
| TU163200 | other | upstream | 1895849 | 24011617 ~ 24013726 (+) | False | fkbp1aa |
| TU163201 | other | upstream | 1895849 | 24011617 ~ 24013726 (+) | False | fkbp1aa |
| TU162995 | other | upstream | 2152461 | 23750417 ~ 23757114 (+) | True | G138010 |
| XR_004578528.1 | other | upstream | 2385599 | 23514586 ~ 23523976 (+) | False | pabpc1l |
| XR_004578635.1 | other | downstream | 537674 | 26454472 ~ 26461875 (+) | False | car15 |
| TU164784 | other | downstream | 537824 | 26454622 ~ 26457276 (+) | False | car15 |
| trnaa-agc | other | downstream | 559480 | 26476278 ~ 26476350 (+) | True | trnaa-agc |
| trnaa-agc_1 | other | downstream | 560007 | 26476805 ~ 26476877 (+) | True | trnaa-agc_1 |
| trnaa-agc_2 | other | downstream | 560589 | 26477387 ~ 26477459 (+) | True | trnaa-agc_2 |
