Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU164784 |
| length | 672 |
| RNA type | TUCP |
| GC content | 0.43 |
| exon number | 4 |
| gene id | car15 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 26400191 ~ 26462321 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU164785 | lncRNA | upstream | 30928 | 26400191 ~ 26423694 (+) | True | car15 |
| TU164434 | lncRNA | upstream | 418489 | 26032594 ~ 26036133 (+) | True | G139235 |
| XR_004578613.1 | lncRNA | upstream | 504173 | 25948849 ~ 25950449 (+) | True | LOC113546140 |
| TU164350 | lncRNA | upstream | 639581 | 25810175 ~ 25815041 (+) | True | G139172 |
| TU164343 | lncRNA | upstream | 771531 | 25672518 ~ 25683091 (+) | True | G139166 |
| TU164826 | lncRNA | downstream | 55616 | 26512892 ~ 26519482 (+) | True | G139551 |
| TU164945 | lncRNA | downstream | 421360 | 26878636 ~ 26899417 (+) | True | G139647 |
| TU164955 | lncRNA | downstream | 433801 | 26891077 ~ 26894530 (+) | True | G139653 |
| TU164991 | lncRNA | downstream | 649653 | 27106929 ~ 27108878 (+) | True | G139686 |
| TU164992 | lncRNA | downstream | 649653 | 27106929 ~ 27108878 (+) | False | G139686 |
| XM_026945904.2 | mRNA | upstream | 16918 | 26435516 ~ 26437704 (+) | True | aplnra |
| XM_026945866.2 | mRNA | upstream | 56761 | 26373810 ~ 26397861 (+) | True | tbc1d10aa |
| XM_026945688.2 | mRNA | upstream | 82825 | 26368415 ~ 26371797 (+) | True | myl7 |
| XM_026945830.2 | mRNA | upstream | 113025 | 26324416 ~ 26341597 (+) | True | npc1l1 |
| XM_026945706.2 | mRNA | upstream | 346719 | 26096883 ~ 26107903 (+) | False | fahd2a |
| XM_026945832.2 | mRNA | downstream | 11043 | 26468319 ~ 26475491 (+) | True | hpdb |
| XM_026945921.2 | mRNA | downstream | 87381 | 26544657 ~ 26548008 (+) | True | fzd10 |
| XM_034306351.1 | mRNA | downstream | 105544 | 26562820 ~ 26567932 (+) | True | LOC117597788 |
| XM_026945698.2 | mRNA | downstream | 134782 | 26592058 ~ 26602240 (+) | True | piwil1 |
| XM_026945700.2 | mRNA | downstream | 134915 | 26592191 ~ 26602240 (+) | False | piwil1 |
| TU164394 | other | upstream | 537824 | 25909575 ~ 25916798 (+) | True | LOC117597866 |
| TU164395 | other | upstream | 537824 | 25916090 ~ 25916798 (+) | False | LOC117597866 |
| trnae-cuc_21 | other | upstream | 1182942 | 25271609 ~ 25271680 (+) | True | trnae-cuc_21 |
| TU163200 | other | upstream | 2440896 | 24011617 ~ 24013726 (+) | False | fkbp1aa |
| trnaa-agc | other | downstream | 19002 | 26476278 ~ 26476350 (+) | True | trnaa-agc |
| trnaa-agc_1 | other | downstream | 19529 | 26476805 ~ 26476877 (+) | True | trnaa-agc_1 |
| trnaa-agc_2 | other | downstream | 20111 | 26477387 ~ 26477459 (+) | True | trnaa-agc_2 |
| TU164841 | other | downstream | 105959 | 26563235 ~ 26566763 (+) | False | LOC117597788 |
| XR_003404685.2 | other | downstream | 168777 | 26626053 ~ 26729831 (+) | False | rimbp2 |
