Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU165666 |
| length | 1179 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G140236 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 27772444 ~ 27773644 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU165554 | lncRNA | upstream | 161109 | 27610947 ~ 27611335 (+) | True | G140170 |
| XR_003404686.2 | lncRNA | upstream | 161884 | 27603917 ~ 27610560 (+) | True | LOC113546137 |
| TU165143 | lncRNA | upstream | 203359 | 27560390 ~ 27569085 (+) | True | G139807 |
| TU165111 | lncRNA | upstream | 281983 | 27439761 ~ 27490461 (+) | False | nr6a1a |
| TU165668 | lncRNA | downstream | 1093 | 27774737 ~ 27851332 (+) | True | G140237 |
| TU165687 | lncRNA | downstream | 70250 | 27843894 ~ 27859701 (+) | False | dbnlb |
| TU165680 | lncRNA | downstream | 157079 | 27930723 ~ 27942087 (+) | True | G140244 |
| TU165672 | lncRNA | downstream | 157566 | 27931210 ~ 27935818 (+) | True | G140240 |
| TU165678 | lncRNA | downstream | 245599 | 28019243 ~ 28021396 (+) | False | arpc5la |
| XM_034306758.1 | mRNA | upstream | 73576 | 27678915 ~ 27698868 (+) | True | fkbp15b |
| XM_034306759.1 | mRNA | upstream | 73576 | 27678915 ~ 27698868 (+) | False | fkbp15b |
| XM_034306760.1 | mRNA | upstream | 74003 | 27678915 ~ 27698441 (+) | False | fkbp15b |
| XM_026945801.2 | mRNA | upstream | 170988 | 27598414 ~ 27601456 (+) | True | tubb2b |
| XM_034306400.1 | mRNA | upstream | 184040 | 27581808 ~ 27588404 (+) | True | fgf17 |
| XM_026945829.2 | mRNA | downstream | 48893 | 27822537 ~ 27831378 (+) | True | ube2d4 |
| XM_034306669.1 | mRNA | downstream | 64601 | 27838245 ~ 27859702 (+) | False | dbnlb |
| XM_034306670.1 | mRNA | downstream | 64601 | 27838245 ~ 27859702 (+) | False | dbnlb |
| XM_034306668.1 | mRNA | downstream | 64602 | 27838246 ~ 27859702 (+) | True | dbnlb |
| XM_026945807.2 | mRNA | downstream | 64603 | 27838247 ~ 27859702 (+) | False | dbnlb |
| TU165116 | other | upstream | 342967 | 27428727 ~ 27429477 (+) | True | G139781 |
| XR_003404685.2 | other | upstream | 1042613 | 26626053 ~ 26729831 (+) | False | rimbp2 |
| TU164841 | other | upstream | 1205681 | 26563235 ~ 26566763 (+) | False | LOC117597788 |
| trnaa-agc_2 | other | upstream | 1294985 | 26477387 ~ 26477459 (+) | True | trnaa-agc_2 |
| trnaa-agc_1 | other | upstream | 1295567 | 26476805 ~ 26476877 (+) | True | trnaa-agc_1 |
| XR_004578633.1 | other | downstream | 245827 | 28019471 ~ 28027450 (+) | False | arpc5la |
| trnag-ccc_1 | other | downstream | 1714329 | 29487973 ~ 29488043 (+) | True | trnag-ccc_1 |
| trnar-ucg_2 | other | downstream | 1714905 | 29488549 ~ 29488621 (+) | True | trnar-ucg_2 |
| trnar-ucg_3 | other | downstream | 1715698 | 29489342 ~ 29489414 (+) | True | trnar-ucg_3 |
| trnag-ccc_2 | other | downstream | 1715876 | 29489520 ~ 29489590 (+) | True | trnag-ccc_2 |
