Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU166294 |
| length | 971 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 4 |
| gene id | G140759 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 28582894 ~ 28748455 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU166269 | lncRNA | upstream | 66214 | 28515570 ~ 28516680 (+) | True | G140748 |
| TU166087 | lncRNA | upstream | 148459 | 28419120 ~ 28434435 (+) | True | G140574 |
| TU165781 | lncRNA | upstream | 411101 | 28171588 ~ 28171793 (+) | True | G140328 |
| TU165771 | lncRNA | upstream | 426983 | 28155708 ~ 28155911 (+) | True | G140318 |
| TU165764 | lncRNA | upstream | 446062 | 28136611 ~ 28136832 (+) | True | G140311 |
| TU166319 | lncRNA | downstream | 379 | 28748834 ~ 28803171 (+) | False | slc7a4 |
| TU166398 | lncRNA | downstream | 410276 | 29158731 ~ 29166206 (+) | False | G140830 |
| TU166396 | lncRNA | downstream | 410674 | 29159129 ~ 29166131 (+) | False | G140830 |
| TU166397 | lncRNA | downstream | 410674 | 29159129 ~ 29166131 (+) | True | G140830 |
| TU166461 | lncRNA | downstream | 491027 | 29239482 ~ 29246316 (+) | True | G140884 |
| XM_026945691.2 | mRNA | upstream | 87861 | 28468419 ~ 28495033 (+) | True | glt1d1 |
| XM_034306294.1 | mRNA | upstream | 169735 | 28325481 ~ 28413159 (+) | False | si:dkeyp-14d3.1 |
| XM_026945841.2 | mRNA | downstream | 39953 | 28788408 ~ 28803174 (+) | True | slc7a4 |
| XM_034307003.1 | mRNA | downstream | 405091 | 29153546 ~ 29164988 (+) | True | sf3a1 |
| XM_026945780.2 | mRNA | downstream | 419025 | 29167480 ~ 29178413 (+) | True | pold2 |
| XM_034307006.1 | mRNA | downstream | 419163 | 29167618 ~ 29178413 (+) | False | pold2 |
| XM_034307008.1 | mRNA | downstream | 558556 | 29307011 ~ 29313313 (+) | True | bag4 |
| XR_004578633.1 | other | upstream | 555444 | 28019471 ~ 28027450 (+) | False | arpc5la |
| TU165116 | other | upstream | 1153417 | 27428727 ~ 27429477 (+) | True | G139781 |
| XR_003404685.2 | other | upstream | 1853063 | 26626053 ~ 26729831 (+) | False | rimbp2 |
| TU164841 | other | upstream | 2016131 | 26563235 ~ 26566763 (+) | False | LOC117597788 |
| trnaa-agc_2 | other | upstream | 2105435 | 26477387 ~ 26477459 (+) | True | trnaa-agc_2 |
| trnag-ccc_1 | other | downstream | 739518 | 29487973 ~ 29488043 (+) | True | trnag-ccc_1 |
| trnar-ucg_2 | other | downstream | 740094 | 29488549 ~ 29488621 (+) | True | trnar-ucg_2 |
| trnar-ucg_3 | other | downstream | 740887 | 29489342 ~ 29489414 (+) | True | trnar-ucg_3 |
| trnag-ccc_2 | other | downstream | 741065 | 29489520 ~ 29489590 (+) | True | trnag-ccc_2 |
| trnar-ucg_4 | other | downstream | 741660 | 29490115 ~ 29490187 (+) | True | trnar-ucg_4 |
