Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU166307 |
| length | 619 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 2 |
| gene id | G140765 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 28638119 ~ 28639737 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU166283 | lncRNA | upstream | 43675 | 28577545 ~ 28594444 (+) | False | G140754 |
| TU166269 | lncRNA | upstream | 121439 | 28515570 ~ 28516680 (+) | True | G140748 |
| TU166087 | lncRNA | upstream | 203684 | 28419120 ~ 28434435 (+) | True | G140574 |
| TU165781 | lncRNA | upstream | 466326 | 28171588 ~ 28171793 (+) | True | G140328 |
| TU165771 | lncRNA | upstream | 482208 | 28155708 ~ 28155911 (+) | True | G140318 |
| TU166296 | lncRNA | downstream | 902 | 28640639 ~ 28748455 (+) | False | G140759 |
| TU166297 | lncRNA | downstream | 902 | 28640639 ~ 28748455 (+) | False | G140759 |
| TU166299 | lncRNA | downstream | 902 | 28640639 ~ 28748455 (+) | False | G140759 |
| TU166300 | lncRNA | downstream | 902 | 28640639 ~ 28728259 (+) | False | G140759 |
| TU166293 | lncRNA | downstream | 86750 | 28726487 ~ 28748455 (+) | True | G140759 |
| XM_026945691.2 | mRNA | upstream | 143086 | 28468419 ~ 28495033 (+) | True | glt1d1 |
| XM_034306294.1 | mRNA | upstream | 224960 | 28325481 ~ 28413159 (+) | False | si:dkeyp-14d3.1 |
| XM_026945841.2 | mRNA | downstream | 148671 | 28788408 ~ 28803174 (+) | True | slc7a4 |
| XM_034307003.1 | mRNA | downstream | 513809 | 29153546 ~ 29164988 (+) | True | sf3a1 |
| XM_026945780.2 | mRNA | downstream | 527743 | 29167480 ~ 29178413 (+) | True | pold2 |
| XM_034307006.1 | mRNA | downstream | 527881 | 29167618 ~ 29178413 (+) | False | pold2 |
| XM_034307008.1 | mRNA | downstream | 667274 | 29307011 ~ 29313313 (+) | True | bag4 |
| XR_004578633.1 | other | upstream | 610669 | 28019471 ~ 28027450 (+) | False | arpc5la |
| TU165116 | other | upstream | 1208642 | 27428727 ~ 27429477 (+) | True | G139781 |
| XR_003404685.2 | other | upstream | 1908288 | 26626053 ~ 26729831 (+) | False | rimbp2 |
| TU164841 | other | upstream | 2071356 | 26563235 ~ 26566763 (+) | False | LOC117597788 |
| trnaa-agc_2 | other | upstream | 2160660 | 26477387 ~ 26477459 (+) | True | trnaa-agc_2 |
| trnag-ccc_1 | other | downstream | 848236 | 29487973 ~ 29488043 (+) | True | trnag-ccc_1 |
| trnar-ucg_2 | other | downstream | 848812 | 29488549 ~ 29488621 (+) | True | trnar-ucg_2 |
| trnar-ucg_3 | other | downstream | 849605 | 29489342 ~ 29489414 (+) | True | trnar-ucg_3 |
| trnag-ccc_2 | other | downstream | 849783 | 29489520 ~ 29489590 (+) | True | trnag-ccc_2 |
| trnar-ucg_4 | other | downstream | 850378 | 29490115 ~ 29490187 (+) | True | trnar-ucg_4 |
