Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU166398 |
| length | 983 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 4 |
| gene id | G140830 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 29158731 ~ 29166206 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU166319 | lncRNA | upstream | 355560 | 28748834 ~ 28803171 (+) | False | slc7a4 |
| TU166296 | lncRNA | upstream | 410276 | 28640639 ~ 28748455 (+) | False | G140759 |
| TU166461 | lncRNA | downstream | 73276 | 29239482 ~ 29246316 (+) | True | G140884 |
| TU166491 | lncRNA | downstream | 130844 | 29297050 ~ 29297797 (+) | True | G140910 |
| TU166505 | lncRNA | downstream | 166208 | 29332414 ~ 29351756 (+) | False | LOC117597881 |
| TU166544 | lncRNA | downstream | 254674 | 29420880 ~ 29421294 (+) | True | G140935 |
| TU166562 | lncRNA | downstream | 337477 | 29503683 ~ 29504872 (+) | True | G140943 |
| XM_026945841.2 | mRNA | upstream | 355557 | 28788408 ~ 28803174 (+) | True | slc7a4 |
| XM_026945691.2 | mRNA | upstream | 663698 | 28468419 ~ 28495033 (+) | True | glt1d1 |
| XM_034306294.1 | mRNA | upstream | 745572 | 28325481 ~ 28413159 (+) | False | si:dkeyp-14d3.1 |
| XM_026945780.2 | mRNA | downstream | 1274 | 29167480 ~ 29178413 (+) | True | pold2 |
| XM_034307006.1 | mRNA | downstream | 1412 | 29167618 ~ 29178413 (+) | False | pold2 |
| XM_034307008.1 | mRNA | downstream | 140805 | 29307011 ~ 29313313 (+) | True | bag4 |
| XM_034307010.1 | mRNA | downstream | 140811 | 29307017 ~ 29310787 (+) | False | bag4 |
| XM_034307007.1 | mRNA | downstream | 140812 | 29307018 ~ 29313313 (+) | False | bag4 |
| XR_004578633.1 | other | upstream | 1131281 | 28019471 ~ 28027450 (+) | False | arpc5la |
| TU165116 | other | upstream | 1729254 | 27428727 ~ 27429477 (+) | True | G139781 |
| XR_003404685.2 | other | upstream | 2428900 | 26626053 ~ 26729831 (+) | False | rimbp2 |
| TU164841 | other | upstream | 2591968 | 26563235 ~ 26566763 (+) | False | LOC117597788 |
| trnaa-agc_2 | other | upstream | 2681272 | 26477387 ~ 26477459 (+) | True | trnaa-agc_2 |
| trnag-ccc_1 | other | downstream | 321767 | 29487973 ~ 29488043 (+) | True | trnag-ccc_1 |
| trnar-ucg_2 | other | downstream | 322343 | 29488549 ~ 29488621 (+) | True | trnar-ucg_2 |
| trnar-ucg_3 | other | downstream | 323136 | 29489342 ~ 29489414 (+) | True | trnar-ucg_3 |
| trnag-ccc_2 | other | downstream | 323314 | 29489520 ~ 29489590 (+) | True | trnag-ccc_2 |
| trnar-ucg_4 | other | downstream | 323909 | 29490115 ~ 29490187 (+) | True | trnar-ucg_4 |
