Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU166920 |
| length | 534 |
| RNA type | TUCP |
| GC content | 0.49 |
| exon number | 3 |
| gene id | LOC113546064 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 29903513 ~ 29929070 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU166562 | lncRNA | upstream | 420705 | 29503683 ~ 29504872 (+) | True | G140943 |
| TU166544 | lncRNA | upstream | 504283 | 29420880 ~ 29421294 (+) | True | G140935 |
| TU166505 | lncRNA | upstream | 573821 | 29332414 ~ 29351756 (+) | False | LOC117597881 |
| TU166491 | lncRNA | upstream | 627780 | 29297050 ~ 29297797 (+) | True | G140910 |
| TU166461 | lncRNA | upstream | 679261 | 29239482 ~ 29246316 (+) | True | G140884 |
| TU166944 | lncRNA | downstream | 11039 | 29937508 ~ 29954068 (+) | False | G141247 |
| TU166928 | lncRNA | downstream | 23389 | 29949858 ~ 29968041 (+) | True | G141235 |
| TU166943 | lncRNA | downstream | 25296 | 29951765 ~ 29954068 (+) | True | G141247 |
| TU166930 | lncRNA | downstream | 38298 | 29964767 ~ 30022919 (+) | True | G141236 |
| TU166931 | lncRNA | downstream | 44934 | 29971403 ~ 30022919 (+) | False | G141236 |
| XM_034306694.1 | mRNA | upstream | 14625 | 29909977 ~ 29910952 (+) | True | LOC117597833 |
| XM_026945800.2 | mRNA | upstream | 22334 | 29899457 ~ 29903243 (+) | True | LOC113546087 |
| XM_034306781.1 | mRNA | upstream | 38222 | 29878359 ~ 29887355 (+) | False | prkab1b |
| XM_034306783.1 | mRNA | upstream | 38222 | 29878376 ~ 29887355 (+) | True | prkab1b |
| XM_034306784.1 | mRNA | upstream | 38222 | 29878497 ~ 29887355 (+) | False | prkab1b |
| XM_034306907.1 | mRNA | downstream | 3780 | 29930249 ~ 29932961 (+) | True | LOC113546086 |
| XM_034306693.1 | mRNA | downstream | 6497 | 29932966 ~ 29946606 (+) | True | hnf1a |
| XM_034306392.1 | mRNA | downstream | 102392 | 30028861 ~ 30040856 (+) | True | ggt5a |
| XM_026945859.2 | mRNA | downstream | 184328 | 30110797 ~ 30131740 (+) | True | lrrc75ba |
| XM_034306882.1 | mRNA | downstream | 207467 | 30133936 ~ 30160538 (+) | False | LOC113546114 |
| TU166919 | other | upstream | 1371 | 29903528 ~ 29924206 (+) | False | LOC113546064 |
| TU166912 | other | upstream | 49311 | 29860261 ~ 29876266 (+) | False | LOC113546008 |
| trnar-ucg_4 | other | upstream | 435390 | 29490115 ~ 29490187 (+) | True | trnar-ucg_4 |
| trnag-ccc_2 | other | upstream | 435987 | 29489520 ~ 29489590 (+) | True | trnag-ccc_2 |
| trnar-ucg_3 | other | upstream | 436163 | 29489342 ~ 29489414 (+) | True | trnar-ucg_3 |
