Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU167107 |
| length | 354 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G141367 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 30189467 ~ 30202765 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU167105 | lncRNA | upstream | 17464 | 30171653 ~ 30172003 (+) | True | G141366 |
| TU167080 | lncRNA | upstream | 24476 | 30164393 ~ 30164991 (+) | True | G141348 |
| TU167055 | lncRNA | upstream | 90625 | 30049968 ~ 30098842 (+) | True | G141328 |
| TU167053 | lncRNA | upstream | 113947 | 30043926 ~ 30075520 (+) | False | G141328 |
| TU167047 | lncRNA | upstream | 146074 | 30042842 ~ 30043393 (+) | True | G141324 |
| TU167121 | lncRNA | downstream | 11020 | 30213785 ~ 30214376 (+) | True | G141375 |
| TU167084 | lncRNA | downstream | 11721 | 30214486 ~ 30214821 (+) | True | G141350 |
| TU167082 | lncRNA | downstream | 12153 | 30214918 ~ 30215730 (+) | False | G141349 |
| TU167083 | lncRNA | downstream | 12153 | 30214918 ~ 30215730 (+) | True | G141349 |
| TU167123 | lncRNA | downstream | 17956 | 30220721 ~ 30220947 (+) | True | G141377 |
| XM_034306942.1 | mRNA | upstream | 7913 | 30177482 ~ 30181554 (+) | True | rnf34a |
| XM_034306944.1 | mRNA | upstream | 7913 | 30177482 ~ 30181554 (+) | False | rnf34a |
| XM_034306943.1 | mRNA | upstream | 7913 | 30177482 ~ 30181554 (+) | False | rnf34a |
| XM_026945842.2 | mRNA | upstream | 28929 | 30133936 ~ 30160538 (+) | False | LOC113546114 |
| XM_026945775.2 | mRNA | downstream | 3743 | 30206508 ~ 30213445 (+) | True | orai1a |
| XM_034306849.1 | mRNA | downstream | 113063 | 30315828 ~ 30322195 (+) | True | LOC113523739 |
| XM_026945797.2 | mRNA | downstream | 174848 | 30377613 ~ 30382370 (+) | True | selenop |
| TU166924 | other | upstream | 260313 | 29910029 ~ 29929154 (+) | True | G141234 |
| TU166932 | other | upstream | 262732 | 29908415 ~ 29926735 (+) | False | LOC113546064 |
| TU166933 | other | upstream | 262732 | 29908415 ~ 29926735 (+) | False | LOC113546064 |
| TU166920 | other | upstream | 262998 | 29925577 ~ 29926469 (+) | False | LOC113546064 |
| TU166919 | other | upstream | 265261 | 29903528 ~ 29924206 (+) | False | LOC113546064 |
