Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026914420.2 |
| length | 1104 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 1 |
| gene id | mc3r |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 9294380 ~ 9295483 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004977 | melanocortin receptor activity | molecular_function |
| id | description |
|---|---|
| K04201 | MC3R; melanocortin 3 receptor |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU153195 | lncRNA | upstream | 159445 | 9119938 ~ 9134935 (+) | True | G129707 |
| TU153191 | lncRNA | upstream | 170511 | 9112784 ~ 9123869 (+) | True | G129704 |
| TU153100 | lncRNA | upstream | 287596 | 9003469 ~ 9006784 (+) | True | G129621 |
| TU153099 | lncRNA | upstream | 287827 | 9003469 ~ 9006553 (+) | False | G129621 |
| TU152913 | lncRNA | upstream | 568492 | 8725452 ~ 8725888 (+) | True | G129439 |
| TU153299 | lncRNA | downstream | 14020 | 9309503 ~ 9312451 (+) | True | G129805 |
| TU153298 | lncRNA | downstream | 16207 | 9311690 ~ 9312451 (+) | False | G129805 |
| TU153327 | lncRNA | downstream | 29225 | 9324708 ~ 9337950 (+) | True | G129831 |
| TU153354 | lncRNA | downstream | 155079 | 9450562 ~ 9495730 (+) | True | G129849 |
| TU153355 | lncRNA | downstream | 157551 | 9453034 ~ 9454409 (+) | True | G129850 |
| XM_026914409.2 | mRNA | upstream | 113550 | 9175099 ~ 9180830 (+) | True | LOC113526950 |
| XM_026938816.2 | mRNA | upstream | 124804 | 9165978 ~ 9169576 (+) | True | pym1 |
| XM_026916436.2 | mRNA | upstream | 291556 | 8950214 ~ 9002824 (+) | True | sema3b |
| XM_026916445.2 | mRNA | upstream | 291556 | 8950214 ~ 9002824 (+) | False | sema3b |
| XM_034306645.1 | mRNA | upstream | 291556 | 8950992 ~ 9002824 (+) | False | sema3b |
| XM_026929048.2 | mRNA | downstream | 174147 | 9469630 ~ 9471279 (+) | True | cebpb |
| XM_026922619.2 | mRNA | downstream | 215456 | 9510939 ~ 9519258 (+) | True | adipor1b |
| XM_026922629.2 | mRNA | downstream | 215456 | 9510939 ~ 9519258 (+) | False | adipor1b |
| XM_026927548.2 | mRNA | downstream | 225971 | 9521454 ~ 9537110 (+) | True | LOC113534601 |
| XM_026927664.2 | mRNA | downstream | 243350 | 9538833 ~ 9543279 (+) | True | tuba5 |
| TU152708 | other | upstream | 981724 | 8307164 ~ 8312656 (+) | True | G129247 |
| TU152202 | other | upstream | 1322631 | 7968235 ~ 7971749 (+) | True | LOC113526371 |
| TU151932 | other | upstream | 1863383 | 7424023 ~ 7430997 (+) | True | mrps36 |
| TU151927 | other | upstream | 1866823 | 7424023 ~ 7427557 (+) | False | mrps36 |
| XR_004578571.1 | other | upstream | 2498304 | 6756763 ~ 6796076 (+) | False | phf19 |
| TU153960 | other | downstream | 1062463 | 10357946 ~ 10358315 (+) | True | G130390 |
| TU153993 | other | downstream | 1261035 | 10556518 ~ 10563561 (+) | True | zmynd12 |
| TU154218 | other | downstream | 1574651 | 10870134 ~ 10874017 (+) | False | mrpl55 |
| XR_003403321.2 | other | downstream | 2326819 | 11622302 ~ 11633844 (+) | False | LOC113530800 |
| XR_003403311.2 | other | downstream | 2326827 | 11622310 ~ 11633844 (+) | True | LOC113530800 |
