Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026925025.2 |
| length | 1050 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 4 |
| gene id | LOC113533128 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 24495503 ~ 24498780 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU163307 | lncRNA | upstream | 131742 | 24362949 ~ 24363761 (+) | True | G138280 |
| TU163261 | lncRNA | upstream | 370934 | 24121610 ~ 24124569 (+) | True | G138239 |
| TU163191 | lncRNA | upstream | 505406 | 23989898 ~ 23990097 (+) | True | G138176 |
| TU163176 | lncRNA | upstream | 600787 | 23890430 ~ 23894716 (+) | False | praf2 |
| TU163000 | lncRNA | upstream | 745135 | 23747463 ~ 23750368 (+) | True | G138014 |
| TU163604 | lncRNA | downstream | 3306 | 24502086 ~ 24502371 (+) | True | G138535 |
| TU163649 | lncRNA | downstream | 147999 | 24646779 ~ 24647451 (+) | True | G138578 |
| TU163669 | lncRNA | downstream | 232207 | 24730987 ~ 24755138 (+) | True | LOC113533328 |
| XR_004578576.1 | lncRNA | downstream | 253260 | 24752040 ~ 24754872 (+) | False | LOC113533328 |
| XR_004578578.1 | lncRNA | downstream | 253761 | 24752541 ~ 24783425 (+) | False | LOC113533328 |
| XM_026925714.2 | mRNA | upstream | 12935 | 24475586 ~ 24482568 (+) | True | LOC113533523 |
| XM_026925320.2 | mRNA | upstream | 29807 | 24434729 ~ 24465696 (+) | True | inpp5l |
| XM_026925010.2 | mRNA | upstream | 64634 | 24408174 ~ 24430869 (+) | True | LOC113533124 |
| XM_026925751.2 | mRNA | upstream | 99659 | 24393579 ~ 24395844 (+) | True | foxb2 |
| XM_026925576.2 | mRNA | upstream | 119983 | 24372757 ~ 24375520 (+) | True | LOC113533424 |
| XM_026925021.2 | mRNA | downstream | 6417 | 24505197 ~ 24559028 (+) | False | sorbs3 |
| XM_026925020.2 | mRNA | downstream | 8101 | 24506881 ~ 24559028 (+) | False | sorbs3 |
| XM_026925019.2 | mRNA | downstream | 8132 | 24506912 ~ 24559028 (+) | False | sorbs3 |
| XM_026925022.2 | mRNA | downstream | 8895 | 24507675 ~ 24559028 (+) | True | sorbs3 |
| XM_026925018.2 | mRNA | downstream | 12952 | 24511732 ~ 24559028 (+) | False | sorbs3 |
| TU163200 | other | upstream | 481777 | 24011617 ~ 24013726 (+) | False | fkbp1aa |
| TU163201 | other | upstream | 481777 | 24011617 ~ 24013726 (+) | False | fkbp1aa |
| TU162995 | other | upstream | 738389 | 23750417 ~ 23757114 (+) | True | G138010 |
| XR_004578528.1 | other | upstream | 971527 | 23514586 ~ 23523976 (+) | False | pabpc1l |
| XR_004578647.1 | other | upstream | 1236050 | 23248348 ~ 23259453 (+) | False | tprg1l |
| trnae-cuc_21 | other | downstream | 772829 | 25271609 ~ 25271680 (+) | True | trnae-cuc_21 |
| TU164394 | other | downstream | 1410795 | 25909575 ~ 25916798 (+) | True | LOC117597866 |
| TU164395 | other | downstream | 1417310 | 25916090 ~ 25916798 (+) | False | LOC117597866 |
| XR_004578635.1 | other | downstream | 1955692 | 26454472 ~ 26461875 (+) | False | car15 |
| TU164784 | other | downstream | 1955842 | 26454622 ~ 26457276 (+) | False | car15 |
