Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026925145.2 |
| length | 3178 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 18 |
| gene id | fgfr1a |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 25183491 ~ 25220173 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0048738 | cardiac muscle tissue development | biological_process |
| GO:0018108 | peptidyl-tyrosine phosphorylation | biological_process |
| GO:0043589 | skin morphogenesis | biological_process |
| GO:0036342 | post-anal tail morphogenesis | biological_process |
| GO:0060173 | limb development | biological_process |
| GO:0043406 | positive regulation of MAP kinase activity | biological_process |
| GO:0008543 | fibroblast growth factor receptor signaling pathway | biological_process |
| GO:0009953 | dorsal/ventral pattern formation | biological_process |
| GO:0031101 | fin regeneration | biological_process |
| GO:0008284 | positive regulation of cell population proliferation | biological_process |
| GO:0060249 | anatomical structure homeostasis | biological_process |
| GO:0001889 | liver development | biological_process |
| GO:0048916 | posterior lateral line development | biological_process |
| GO:0042664 | negative regulation of endodermal cell fate specification | biological_process |
| GO:0010863 | positive regulation of phospholipase C activity | biological_process |
| GO:0005829 | cytosol | cellular_component |
| GO:0005887 | integral component of plasma membrane | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0008201 | heparin binding | molecular_function |
| GO:0017134 | fibroblast growth factor binding | molecular_function |
| GO:0005007 | fibroblast growth factor-activated receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU164017 | lncRNA | upstream | 49243 | 25132741 ~ 25134251 (+) | False | LOC113533115 |
| XR_003403403.2 | lncRNA | upstream | 333950 | 24848068 ~ 24849544 (+) | True | LOC113533216 |
| XR_004578578.1 | lncRNA | upstream | 400069 | 24752541 ~ 24783425 (+) | False | LOC113533328 |
| XR_004578576.1 | lncRNA | upstream | 428622 | 24752040 ~ 24754872 (+) | False | LOC113533328 |
| TU164055 | lncRNA | downstream | 58258 | 25277297 ~ 25284948 (+) | True | G138907 |
| XR_004578607.1 | lncRNA | downstream | 90866 | 25309905 ~ 25333613 (+) | True | LOC113533374 |
| XR_004578606.1 | lncRNA | downstream | 90866 | 25309905 ~ 25333613 (+) | False | LOC113533374 |
| XR_004578605.1 | lncRNA | downstream | 202015 | 25421054 ~ 25428188 (+) | True | LOC117597843 |
| TU164115 | lncRNA | downstream | 229576 | 25448615 ~ 25451577 (+) | True | G138961 |
| XM_034306325.1 | mRNA | upstream | 25690 | 25155289 ~ 25157804 (+) | True | ankrd39 |
| XM_026925631.2 | mRNA | upstream | 25690 | 25155289 ~ 25157804 (+) | False | ankrd39 |
| XM_026925629.2 | mRNA | upstream | 25690 | 25155289 ~ 25157804 (+) | False | ankrd39 |
| XM_026925630.2 | mRNA | upstream | 25690 | 25155289 ~ 25157804 (+) | False | ankrd39 |
| XM_026924976.2 | mRNA | upstream | 49236 | 25132745 ~ 25134258 (+) | True | LOC113533115 |
| XM_026925126.2 | mRNA | downstream | 16055 | 25235094 ~ 25247013 (+) | True | lgi3 |
| XM_026925927.2 | mRNA | downstream | 30706 | 25249745 ~ 25256383 (+) | True | chmp7 |
| XM_026925501.2 | mRNA | downstream | 38959 | 25257998 ~ 25269449 (+) | True | entpd4 |
| XM_026925502.2 | mRNA | downstream | 38961 | 25258000 ~ 25269449 (+) | False | entpd4 |
| XM_026925488.2 | mRNA | downstream | 57342 | 25276381 ~ 25291575 (+) | True | slc25a37 |
| TU163200 | other | upstream | 1169768 | 24011617 ~ 24013726 (+) | False | fkbp1aa |
| TU163201 | other | upstream | 1169768 | 24011617 ~ 24013726 (+) | False | fkbp1aa |
| TU162995 | other | upstream | 1426380 | 23750417 ~ 23757114 (+) | True | G138010 |
| XR_004578528.1 | other | upstream | 1659518 | 23514586 ~ 23523976 (+) | False | pabpc1l |
| XR_004578647.1 | other | upstream | 1924041 | 23248348 ~ 23259453 (+) | False | tprg1l |
| trnae-cuc_21 | other | downstream | 52570 | 25271609 ~ 25271680 (+) | True | trnae-cuc_21 |
| TU164394 | other | downstream | 690536 | 25909575 ~ 25916798 (+) | True | LOC117597866 |
| TU164395 | other | downstream | 697051 | 25916090 ~ 25916798 (+) | False | LOC117597866 |
| XR_004578635.1 | other | downstream | 1235433 | 26454472 ~ 26461875 (+) | False | car15 |
| TU164784 | other | downstream | 1235583 | 26454622 ~ 26457276 (+) | False | car15 |
