Item | Value |
---|---|
RNA id | XM_026925368.2 |
length | 1205 |
RNA type | mRNA |
GC content | 0.43 |
exon number | 8 |
gene id | LOC113533311 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047602.1 |
NCBI id | CM018548.1 |
chromosome length | 30442583 |
location | 22174129 ~ 22181491 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
id | name | namespace |
---|---|---|
GO:0008210 | estrogen metabolic process | biological_process |
GO:0006805 | xenobiotic metabolic process | biological_process |
GO:0006584 | catecholamine metabolic process | biological_process |
GO:0005737 | cytoplasm | cellular_component |
GO:0004304 | estrone sulfotransferase activity | molecular_function |
id | description |
---|---|
K01014 | SULT1A; aryl sulfotransferase |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU161800 | lncRNA | upstream | 24352 | 22148623 ~ 22149777 (+) | True | G137017 |
TU161753 | lncRNA | upstream | 50378 | 22092595 ~ 22123751 (+) | False | LOC113533283 |
TU161242 | lncRNA | upstream | 314461 | 21843187 ~ 21859668 (+) | False | LOC113533434 |
TU161246 | lncRNA | upstream | 334277 | 21839632 ~ 21839852 (+) | True | G136544 |
TU161232 | lncRNA | upstream | 348807 | 21824989 ~ 21825322 (+) | True | G136532 |
TU161862 | lncRNA | downstream | 123238 | 22304729 ~ 22307615 (+) | True | G137057 |
TU161897 | lncRNA | downstream | 285276 | 22466767 ~ 22467029 (+) | True | G137086 |
TU161898 | lncRNA | downstream | 287143 | 22468634 ~ 22468839 (+) | True | G137087 |
TU161899 | lncRNA | downstream | 289550 | 22471041 ~ 22471330 (+) | True | G137088 |
TU162067 | lncRNA | downstream | 327720 | 22509211 ~ 22509494 (+) | False | LOC113533405 |
XM_034306843.1 | mRNA | upstream | 3382 | 22163978 ~ 22170747 (+) | True | LOC113533433 |
XM_026925928.2 | mRNA | upstream | 25796 | 22145089 ~ 22148333 (+) | True | b3galt4 |
XM_026925929.2 | mRNA | upstream | 25796 | 22145089 ~ 22148333 (+) | False | b3galt4 |
XM_026925331.2 | mRNA | upstream | 50799 | 22110746 ~ 22123330 (+) | False | LOC113533283 |
XM_026925196.2 | mRNA | downstream | 6329 | 22187820 ~ 22194724 (+) | True | LOC113533223 |
XM_026925194.2 | mRNA | downstream | 15258 | 22196749 ~ 22205160 (+) | True | LOC113533222 |
XM_026925195.2 | mRNA | downstream | 15258 | 22196749 ~ 22205160 (+) | False | LOC113533222 |
XM_026925197.2 | mRNA | downstream | 24386 | 22205877 ~ 22212021 (+) | True | LOC113533224 |
XM_034306976.1 | mRNA | downstream | 70782 | 22252273 ~ 22266629 (+) | True | qars1 |
trnaa-ugc_5 | other | upstream | 483637 | 21690421 ~ 21690492 (+) | True | trnaa-ugc_5 |
trnaa-ugc_4 | other | upstream | 484033 | 21690025 ~ 21690096 (+) | True | trnaa-ugc_4 |
trnat-cgu_3 | other | upstream | 484391 | 21689667 ~ 21689738 (+) | True | trnat-cgu_3 |
trnaa-ugc_3 | other | upstream | 485538 | 21688520 ~ 21688591 (+) | True | trnaa-ugc_3 |
trnaa-ugc_2 | other | upstream | 485934 | 21688124 ~ 21688195 (+) | True | trnaa-ugc_2 |
XR_004578647.1 | other | downstream | 1066857 | 23248348 ~ 23259453 (+) | False | tprg1l |
XR_004578528.1 | other | downstream | 1333095 | 23514586 ~ 23523976 (+) | False | pabpc1l |
TU162995 | other | downstream | 1568926 | 23750417 ~ 23757114 (+) | True | G138010 |
TU163200 | other | downstream | 1830126 | 24011617 ~ 24013726 (+) | False | fkbp1aa |
TU163201 | other | downstream | 1830126 | 24011617 ~ 24013726 (+) | False | fkbp1aa |