Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026925487.2 |
| length | 1239 |
| RNA type | mRNA |
| GC content | 0.38 |
| exon number | 4 |
| gene id | b2ml |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 25662794 ~ 25665298 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006955 | immune response | biological_process |
| GO:0002474 | antigen processing and presentation of peptide antigen via MHC class I | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0042612 | MHC class I protein complex | cellular_component |
| id | description |
|---|---|
| K08055 | B2M; beta-2-microglobulin |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU164300 | lncRNA | upstream | 104129 | 25557340 ~ 25558665 (+) | False | egr3 |
| TU164115 | lncRNA | upstream | 211217 | 25448615 ~ 25451577 (+) | True | G138961 |
| XR_004578605.1 | lncRNA | upstream | 234606 | 25421054 ~ 25428188 (+) | True | LOC117597843 |
| XR_004578607.1 | lncRNA | upstream | 329181 | 25309905 ~ 25333613 (+) | True | LOC113533374 |
| TU164343 | lncRNA | downstream | 7220 | 25672518 ~ 25683091 (+) | True | G139166 |
| TU164350 | lncRNA | downstream | 144877 | 25810175 ~ 25815041 (+) | True | G139172 |
| XR_004578613.1 | lncRNA | downstream | 283551 | 25948849 ~ 25950449 (+) | True | LOC113546140 |
| TU164434 | lncRNA | downstream | 367296 | 26032594 ~ 26036133 (+) | True | G139235 |
| TU164785 | lncRNA | downstream | 734893 | 26400191 ~ 26423694 (+) | True | car15 |
| XM_026925568.2 | mRNA | upstream | 55930 | 25563821 ~ 25606864 (+) | True | bin3 |
| XM_026925935.2 | mRNA | upstream | 104063 | 25551894 ~ 25558731 (+) | True | egr3 |
| XM_026925668.2 | mRNA | upstream | 119206 | 25453639 ~ 25543588 (+) | False | LOC113533497 |
| XM_026925669.2 | mRNA | upstream | 119206 | 25453819 ~ 25543588 (+) | True | LOC113533497 |
| XM_026925667.2 | mRNA | upstream | 119208 | 25453822 ~ 25543586 (+) | False | LOC113533497 |
| XM_026925224.2 | mRNA | downstream | 1627 | 25666925 ~ 25671900 (+) | True | ubl4a |
| XM_026925535.2 | mRNA | downstream | 20907 | 25686205 ~ 25703125 (+) | True | si:dkey-32e23.4 |
| XM_026925537.2 | mRNA | downstream | 20907 | 25686205 ~ 25703125 (+) | False | si:dkey-32e23.4 |
| XM_026925536.2 | mRNA | downstream | 23134 | 25688432 ~ 25703125 (+) | False | si:dkey-32e23.4 |
| XM_026925905.2 | mRNA | downstream | 97667 | 25762965 ~ 25804442 (+) | True | disp3 |
| trnae-cuc_21 | other | upstream | 391114 | 25271609 ~ 25271680 (+) | True | trnae-cuc_21 |
| TU163200 | other | upstream | 1649068 | 24011617 ~ 24013726 (+) | False | fkbp1aa |
| TU163201 | other | upstream | 1649068 | 24011617 ~ 24013726 (+) | False | fkbp1aa |
| TU162995 | other | upstream | 1905680 | 23750417 ~ 23757114 (+) | True | G138010 |
| XR_004578528.1 | other | upstream | 2138818 | 23514586 ~ 23523976 (+) | False | pabpc1l |
| TU164394 | other | downstream | 244277 | 25909575 ~ 25916798 (+) | True | LOC117597866 |
| TU164395 | other | downstream | 250792 | 25916090 ~ 25916798 (+) | False | LOC117597866 |
| XR_004578635.1 | other | downstream | 789174 | 26454472 ~ 26461875 (+) | False | car15 |
| TU164784 | other | downstream | 789324 | 26454622 ~ 26457276 (+) | False | car15 |
| trnaa-agc | other | downstream | 810980 | 26476278 ~ 26476350 (+) | True | trnaa-agc |
