Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026927924.2 |
| length | 1067 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 7 |
| gene id | uxt |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 4968226 ~ 4972284 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006457 | protein folding | biological_process |
| GO:0016272 | prefoldin complex | cellular_component |
| GO:0051082 | unfolded protein binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU150287 | lncRNA | upstream | 28840 | 4885020 ~ 4939386 (+) | True | G127155 |
| TU150279 | lncRNA | upstream | 126092 | 4841426 ~ 4842134 (+) | True | G127147 |
| TU150236 | lncRNA | upstream | 172970 | 4772794 ~ 4795256 (+) | True | G127105 |
| TU150205 | lncRNA | upstream | 295352 | 4626133 ~ 4672874 (+) | False | plxnb3 |
| TU150204 | lncRNA | upstream | 295352 | 4662979 ~ 4672874 (+) | False | plxnb3 |
| XR_004578588.1 | lncRNA | downstream | 78947 | 5051231 ~ 5053827 (+) | True | LOC117597829 |
| TU150340 | lncRNA | downstream | 83349 | 5055633 ~ 5055834 (+) | True | G127198 |
| TU150355 | lncRNA | downstream | 225642 | 5197926 ~ 5202226 (+) | True | G127210 |
| TU150450 | lncRNA | downstream | 605493 | 5577777 ~ 5594115 (+) | True | G127293 |
| TU150944 | lncRNA | downstream | 934961 | 5907245 ~ 5907946 (+) | False | tbc1d22b |
| XM_026927919.2 | mRNA | upstream | 7110 | 4935966 ~ 4961116 (+) | True | usp11 |
| XM_026928341.2 | mRNA | upstream | 43462 | 4859207 ~ 4924764 (+) | True | grm6a |
| XM_026927996.2 | mRNA | upstream | 127174 | 4833118 ~ 4841052 (+) | True | comta |
| XM_026927999.2 | mRNA | upstream | 140332 | 4818221 ~ 4827894 (+) | False | comta |
| XM_034306665.1 | mRNA | downstream | 3644 | 4975928 ~ 5001520 (+) | True | elk1 |
| XM_026927951.2 | mRNA | downstream | 3644 | 4975928 ~ 5001520 (+) | False | elk1 |
| XM_026928179.2 | mRNA | downstream | 50100 | 5022384 ~ 5051208 (+) | False | si:ch211-180f4.1 |
| XM_026928180.2 | mRNA | downstream | 66061 | 5038345 ~ 5051208 (+) | False | si:ch211-180f4.1 |
| XM_034306660.1 | mRNA | downstream | 66173 | 5038457 ~ 5051208 (+) | False | si:ch211-180f4.1 |
| XR_004578621.1 | other | upstream | 205235 | 4743239 ~ 4762991 (+) | False | srpk3 |
| TU149628 | other | upstream | 690149 | 4220684 ~ 4278077 (+) | False | ssuh2rs1 |
| XR_004578620.1 | other | upstream | 866537 | 4095269 ~ 4101689 (+) | False | si:ch73-233m11.2 |
| XR_003403572.2 | other | upstream | 2736086 | 2216102 ~ 2232140 (+) | False | alkal1 |
| TU147950 | other | upstream | 3036808 | 1877041 ~ 1931418 (+) | False | LOC113535242 |
| XR_004578572.1 | other | downstream | 1784479 | 6756763 ~ 6805310 (+) | False | phf19 |
| XR_004578571.1 | other | downstream | 1784479 | 6756763 ~ 6796076 (+) | False | phf19 |
| TU151927 | other | downstream | 2451739 | 7424023 ~ 7427557 (+) | False | mrps36 |
| TU151932 | other | downstream | 2451739 | 7424023 ~ 7430997 (+) | True | mrps36 |
| TU152202 | other | downstream | 2995951 | 7968235 ~ 7971749 (+) | True | LOC113526371 |
