Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026928189.2 |
| length | 737 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 3 |
| gene id | lhfpl5b |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 12916438 ~ 12921186 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| K23893 | LHFPL; LHFPL tetraspan subfamily member protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004578530.1 | lncRNA | upstream | 106700 | 12809123 ~ 12809738 (+) | True | LOC117597782 |
| TU155457 | lncRNA | upstream | 186916 | 12712625 ~ 12729522 (+) | True | G131605 |
| TU155458 | lncRNA | upstream | 203953 | 12690167 ~ 12712485 (+) | True | G131606 |
| XR_004578634.1 | lncRNA | upstream | 214937 | 12700712 ~ 12701501 (+) | True | LOC117597872 |
| TU155155 | lncRNA | upstream | 311804 | 12603517 ~ 12604634 (+) | False | rbm15 |
| TU155563 | lncRNA | downstream | 16118 | 12937304 ~ 12940631 (+) | True | LOC117597771 |
| XR_004578521.1 | lncRNA | downstream | 17477 | 12938663 ~ 12941456 (+) | False | LOC117597771 |
| TU155603 | lncRNA | downstream | 82209 | 13003395 ~ 13006090 (+) | False | G131721 |
| TU155604 | lncRNA | downstream | 82209 | 13003395 ~ 13006090 (+) | True | G131721 |
| TU155606 | lncRNA | downstream | 82209 | 13003395 ~ 13006090 (+) | False | G131721 |
| XM_034307046.1 | mRNA | upstream | 118071 | 12792216 ~ 12798367 (+) | False | dclre1b |
| XM_026911429.2 | mRNA | upstream | 118071 | 12792450 ~ 12798367 (+) | True | dclre1b |
| XM_034307047.1 | mRNA | upstream | 118071 | 12792450 ~ 12798367 (+) | False | dclre1b |
| XM_026909634.2 | mRNA | upstream | 133281 | 12775926 ~ 12783157 (+) | True | adora1b |
| XM_026922582.2 | mRNA | upstream | 254293 | 12659028 ~ 12662145 (+) | True | LOC113531715 |
| XM_026947120.2 | mRNA | downstream | 56841 | 12978027 ~ 12979366 (+) | True | c8h1orf194 |
| XM_026947202.2 | mRNA | downstream | 56845 | 12978031 ~ 12979366 (+) | False | c8h1orf194 |
| XM_026939856.2 | mRNA | downstream | 64241 | 12985427 ~ 12994779 (+) | True | inavaa |
| XM_026926859.2 | mRNA | downstream | 134264 | 13055450 ~ 13061438 (+) | False | LOC113534124 |
| XM_026926775.2 | mRNA | downstream | 134302 | 13055488 ~ 13061438 (+) | True | LOC113534124 |
| trnad-guc_1 | other | upstream | 534368 | 12381999 ~ 12382070 (+) | True | trnad-guc_1 |
| TU154763 | other | upstream | 1205893 | 11709454 ~ 11710545 (+) | False | porcn |
| TU154756 | other | upstream | 1207006 | 11705655 ~ 11709432 (+) | False | porcn |
| trnav-cac_9 | other | downstream | 140750 | 13061936 ~ 13062008 (+) | True | trnav-cac_9 |
| trnaf-gaa_25 | other | downstream | 142864 | 13064050 ~ 13064122 (+) | True | trnaf-gaa_25 |
| trnae-cuc_18 | other | downstream | 448362 | 13369548 ~ 13369619 (+) | True | trnae-cuc_18 |
| TU156117 | other | downstream | 784070 | 13705256 ~ 13707550 (+) | False | LOC113527348 |
| TU156645 | other | downstream | 1400986 | 14322172 ~ 14323450 (+) | True | G132595 |
