Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026928502.2 |
| length | 929 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 2 |
| gene id | LOC113535261 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 7694733 ~ 7696569 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU152023 | lncRNA | upstream | 5505 | 7617545 ~ 7689228 (+) | True | G128703 |
| TU152002 | lncRNA | upstream | 130390 | 7564045 ~ 7564343 (+) | True | G128682 |
| TU151998 | lncRNA | upstream | 142450 | 7550567 ~ 7552283 (+) | True | G128678 |
| TU151959 | lncRNA | upstream | 192726 | 7501557 ~ 7502007 (+) | True | G128642 |
| TU151955 | lncRNA | upstream | 197917 | 7492348 ~ 7496816 (+) | True | G128638 |
| TU152092 | lncRNA | downstream | 48298 | 7744867 ~ 7766724 (+) | True | G128757 |
| TU152090 | lncRNA | downstream | 48965 | 7745534 ~ 7766724 (+) | False | G128757 |
| TU152091 | lncRNA | downstream | 48965 | 7745534 ~ 7766724 (+) | False | G128757 |
| TU152094 | lncRNA | downstream | 54020 | 7750589 ~ 7750929 (+) | True | G128759 |
| TU152097 | lncRNA | downstream | 55565 | 7752134 ~ 7768745 (+) | True | G128761 |
| XM_026928361.2 | mRNA | upstream | 7395 | 7684995 ~ 7687338 (+) | True | ndufaf2 |
| XM_026928231.2 | mRNA | upstream | 202668 | 7483160 ~ 7492065 (+) | False | rab3c |
| XM_026928230.2 | mRNA | upstream | 202668 | 7483745 ~ 7492065 (+) | False | rab3c |
| XM_026928229.2 | mRNA | upstream | 202668 | 7485329 ~ 7492065 (+) | False | rab3c |
| XM_026928232.2 | mRNA | upstream | 202668 | 7485993 ~ 7492065 (+) | True | rab3c |
| XM_026916283.2 | mRNA | downstream | 159942 | 7856511 ~ 7861570 (+) | False | smim1 |
| XM_026916265.2 | mRNA | downstream | 161134 | 7857703 ~ 7861570 (+) | False | smim1 |
| XM_026916274.2 | mRNA | downstream | 161506 | 7858075 ~ 7861570 (+) | False | smim1 |
| XM_026928478.2 | mRNA | downstream | 176824 | 7873393 ~ 7909722 (+) | True | cep104 |
| XM_034306638.1 | mRNA | downstream | 176824 | 7873393 ~ 7909722 (+) | False | cep104 |
| TU151932 | other | upstream | 263736 | 7424023 ~ 7430997 (+) | True | mrps36 |
| TU151927 | other | upstream | 267176 | 7424023 ~ 7427557 (+) | False | mrps36 |
| XR_004578572.1 | other | upstream | 889423 | 6756763 ~ 6805310 (+) | False | phf19 |
| XR_004578571.1 | other | upstream | 898657 | 6756763 ~ 6796076 (+) | False | phf19 |
| XR_004578621.1 | other | upstream | 2931742 | 4743239 ~ 4762991 (+) | False | srpk3 |
| TU152202 | other | downstream | 271666 | 7968235 ~ 7971749 (+) | True | LOC113526371 |
| TU152708 | other | downstream | 610595 | 8307164 ~ 8312656 (+) | True | G129247 |
| TU153960 | other | downstream | 2661377 | 10357946 ~ 10358315 (+) | True | G130390 |
| TU153993 | other | downstream | 2859949 | 10556518 ~ 10563561 (+) | True | zmynd12 |
| TU154218 | other | downstream | 3173565 | 10870134 ~ 10874017 (+) | False | mrpl55 |
