Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034306480.1 |
| length | 1061 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 8 |
| gene id | LOC113526970 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 9594790 ~ 9601084 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU153354 | lncRNA | upstream | 99060 | 9450562 ~ 9495730 (+) | True | G129849 |
| TU153371 | lncRNA | upstream | 123513 | 9462088 ~ 9471277 (+) | False | cebpb |
| TU153374 | lncRNA | upstream | 123573 | 9462088 ~ 9471217 (+) | False | cebpb |
| TU153355 | lncRNA | upstream | 140381 | 9453034 ~ 9454409 (+) | True | G129850 |
| TU153327 | lncRNA | upstream | 256840 | 9324708 ~ 9337950 (+) | True | G129831 |
| TU153546 | lncRNA | downstream | 60162 | 9661246 ~ 9664685 (+) | False | LOC113532719 |
| TU153547 | lncRNA | downstream | 70983 | 9672067 ~ 9672335 (+) | True | G129996 |
| TU153572 | lncRNA | downstream | 114572 | 9715656 ~ 9715868 (+) | True | G130021 |
| TU153789 | lncRNA | downstream | 432266 | 10033350 ~ 10033565 (+) | True | G130231 |
| TU153848 | lncRNA | downstream | 484477 | 10085561 ~ 10147134 (+) | True | G130285 |
| XM_026929718.2 | mRNA | upstream | 12050 | 9574382 ~ 9582740 (+) | True | LOC113536035 |
| XM_026915443.2 | mRNA | upstream | 21752 | 9547306 ~ 9573038 (+) | True | kdm5bb |
| XM_034306582.1 | mRNA | upstream | 21752 | 9548026 ~ 9573038 (+) | False | kdm5bb |
| XM_034306581.1 | mRNA | upstream | 21752 | 9549636 ~ 9573038 (+) | False | kdm5bb |
| XM_026927664.2 | mRNA | upstream | 51511 | 9538833 ~ 9543279 (+) | True | tuba5 |
| XM_034306488.1 | mRNA | downstream | 9709 | 9610793 ~ 9614695 (+) | False | LOC117597803 |
| XM_034306485.1 | mRNA | downstream | 9709 | 9610793 ~ 9614694 (+) | True | LOC117597803 |
| XM_034306489.1 | mRNA | downstream | 9709 | 9610793 ~ 9614694 (+) | False | LOC117597803 |
| XM_034306486.1 | mRNA | downstream | 9709 | 9610793 ~ 9614694 (+) | False | LOC117597803 |
| XM_034306487.1 | mRNA | downstream | 9709 | 9610793 ~ 9614694 (+) | False | LOC117597803 |
| TU152708 | other | upstream | 1282134 | 8307164 ~ 8312656 (+) | True | G129247 |
| TU152202 | other | upstream | 1623041 | 7968235 ~ 7971749 (+) | True | LOC113526371 |
| TU151932 | other | upstream | 2163793 | 7424023 ~ 7430997 (+) | True | mrps36 |
| TU151927 | other | upstream | 2167233 | 7424023 ~ 7427557 (+) | False | mrps36 |
| XR_004578571.1 | other | upstream | 2798714 | 6756763 ~ 6796076 (+) | False | phf19 |
| TU153960 | other | downstream | 756862 | 10357946 ~ 10358315 (+) | True | G130390 |
| TU153993 | other | downstream | 955434 | 10556518 ~ 10563561 (+) | True | zmynd12 |
| TU154218 | other | downstream | 1269050 | 10870134 ~ 10874017 (+) | False | mrpl55 |
| XR_003403321.2 | other | downstream | 2021218 | 11622302 ~ 11633844 (+) | False | LOC113530800 |
| XR_003403311.2 | other | downstream | 2021226 | 11622310 ~ 11633844 (+) | True | LOC113530800 |
