Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnae-cuc_21 |
| length | 72 |
| RNA type | tRNA |
| GC content | 0.58 |
| exon number | 1 |
| gene id | trnae-cuc_21 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 25271609 ~ 25271680 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU164017 | lncRNA | upstream | 137358 | 25132741 ~ 25134251 (+) | False | LOC113533115 |
| XR_003403403.2 | lncRNA | upstream | 422065 | 24848068 ~ 24849544 (+) | True | LOC113533216 |
| XR_004578578.1 | lncRNA | upstream | 488184 | 24752541 ~ 24783425 (+) | False | LOC113533328 |
| TU163669 | lncRNA | upstream | 516471 | 24730987 ~ 24755138 (+) | True | LOC113533328 |
| XR_004578576.1 | lncRNA | upstream | 516737 | 24752040 ~ 24754872 (+) | False | LOC113533328 |
| TU164055 | lncRNA | downstream | 5617 | 25277297 ~ 25284948 (+) | True | G138907 |
| XR_004578607.1 | lncRNA | downstream | 38225 | 25309905 ~ 25333613 (+) | True | LOC113533374 |
| XR_004578606.1 | lncRNA | downstream | 38225 | 25309905 ~ 25333613 (+) | False | LOC113533374 |
| XR_004578605.1 | lncRNA | downstream | 149374 | 25421054 ~ 25428188 (+) | True | LOC117597843 |
| TU164115 | lncRNA | downstream | 176935 | 25448615 ~ 25451577 (+) | True | G138961 |
| XM_026925501.2 | mRNA | upstream | 2160 | 25257998 ~ 25269449 (+) | True | entpd4 |
| XM_026925502.2 | mRNA | upstream | 2160 | 25258000 ~ 25269449 (+) | False | entpd4 |
| XM_026925927.2 | mRNA | upstream | 15226 | 25249745 ~ 25256383 (+) | True | chmp7 |
| XM_026925126.2 | mRNA | upstream | 24596 | 25235094 ~ 25247013 (+) | True | lgi3 |
| XM_026925141.2 | mRNA | upstream | 51436 | 25183492 ~ 25220173 (+) | True | fgfr1a |
| XM_026925488.2 | mRNA | downstream | 4701 | 25276381 ~ 25291575 (+) | True | slc25a37 |
| XM_026925355.2 | mRNA | downstream | 163521 | 25435201 ~ 25446874 (+) | True | LOC113533297 |
| XM_026925356.2 | mRNA | downstream | 163521 | 25435201 ~ 25446874 (+) | False | LOC113533297 |
| XM_026925668.2 | mRNA | downstream | 181959 | 25453639 ~ 25543588 (+) | False | LOC113533497 |
| XM_026925669.2 | mRNA | downstream | 182139 | 25453819 ~ 25543588 (+) | True | LOC113533497 |
| TU163200 | other | upstream | 1257883 | 24011617 ~ 24013726 (+) | False | fkbp1aa |
| TU163201 | other | upstream | 1257883 | 24011617 ~ 24013726 (+) | False | fkbp1aa |
| TU162995 | other | upstream | 1514495 | 23750417 ~ 23757114 (+) | True | G138010 |
| XR_004578528.1 | other | upstream | 1747633 | 23514586 ~ 23523976 (+) | False | pabpc1l |
| XR_004578647.1 | other | upstream | 2012156 | 23248348 ~ 23259453 (+) | False | tprg1l |
| TU164394 | other | downstream | 637895 | 25909575 ~ 25916798 (+) | True | LOC117597866 |
| TU164395 | other | downstream | 644410 | 25916090 ~ 25916798 (+) | False | LOC117597866 |
| XR_004578635.1 | other | downstream | 1182792 | 26454472 ~ 26461875 (+) | False | car15 |
| TU164784 | other | downstream | 1182942 | 26454622 ~ 26457276 (+) | False | car15 |
| trnaa-agc | other | downstream | 1204598 | 26476278 ~ 26476350 (+) | True | trnaa-agc |
