Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU205689 |
| length | 250 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 2 |
| gene id | G173749 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 572488 ~ 572792 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU205663 | lncRNA | upstream | 36187 | 535550 ~ 536301 (+) | True | G173725 |
| TU205662 | lncRNA | upstream | 37557 | 533175 ~ 534931 (+) | True | G173724 |
| TU205609 | lncRNA | upstream | 124538 | 447690 ~ 447950 (+) | True | G173679 |
| TU205591 | lncRNA | upstream | 236734 | 335028 ~ 335754 (+) | False | G173662 |
| TU205592 | lncRNA | upstream | 236734 | 335028 ~ 335754 (+) | True | G173662 |
| TU205694 | lncRNA | downstream | 12664 | 585456 ~ 586133 (+) | True | G173752 |
| TU205701 | lncRNA | downstream | 19937 | 592729 ~ 593644 (+) | True | G173756 |
| TU205702 | lncRNA | downstream | 20049 | 592841 ~ 593644 (+) | False | G173756 |
| TU205706 | lncRNA | downstream | 22019 | 594811 ~ 596679 (+) | True | G173758 |
| TU205723 | lncRNA | downstream | 40673 | 613465 ~ 613977 (+) | True | G173769 |
| XM_034308433.1 | mRNA | upstream | 309428 | 201128 ~ 263060 (+) | False | tub |
| XM_026930652.2 | mRNA | downstream | 71027 | 643819 ~ 647035 (+) | True | slc7a6os |
| XM_034308878.1 | mRNA | downstream | 173171 | 745963 ~ 758953 (+) | True | LOC117598424 |
| XM_034308879.1 | mRNA | downstream | 217582 | 790374 ~ 822723 (+) | True | ccdc102a |
| XM_026930339.2 | mRNA | downstream | 279515 | 852307 ~ 894448 (+) | True | dok4 |
| XM_026930340.2 | mRNA | downstream | 280032 | 852824 ~ 894448 (+) | False | dok4 |
| TU205686 | other | upstream | 2162 | 568813 ~ 570326 (+) | True | G173748 |
| TU205778 | other | downstream | 169229 | 742021 ~ 742710 (+) | True | G173819 |
| TU205870 | other | downstream | 788990 | 1361782 ~ 1364931 (+) | True | G173898 |
| TU206587 | other | downstream | 1486178 | 2058970 ~ 2060283 (+) | True | G174536 |
| TU206600 | other | downstream | 1505285 | 2078077 ~ 2078627 (+) | True | G174546 |
| TU207714 | other | downstream | 3074578 | 3647370 ~ 3658276 (+) | False | btbd10b |
