Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU205780 |
| length | 248 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 2 |
| gene id | G173821 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 762204 ~ 790257 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU205711 | lncRNA | upstream | 22697 | 687350 ~ 739507 (+) | True | G173761 |
| TU205723 | lncRNA | upstream | 148227 | 613465 ~ 613977 (+) | True | G173769 |
| TU205706 | lncRNA | upstream | 165525 | 594811 ~ 596679 (+) | True | G173758 |
| TU205701 | lncRNA | upstream | 168560 | 592729 ~ 593644 (+) | True | G173756 |
| TU205702 | lncRNA | upstream | 168560 | 592841 ~ 593644 (+) | False | G173756 |
| TU205782 | lncRNA | downstream | 7796 | 798053 ~ 820140 (+) | True | G173823 |
| TU205786 | lncRNA | downstream | 25656 | 815913 ~ 822683 (+) | False | ccdc102a |
| TU205819 | lncRNA | downstream | 119382 | 909639 ~ 910317 (+) | True | G173854 |
| TU205830 | lncRNA | downstream | 234230 | 1024487 ~ 1025616 (+) | True | G173865 |
| TU205849 | lncRNA | downstream | 343761 | 1134018 ~ 1134612 (+) | True | G173880 |
| XM_034308878.1 | mRNA | upstream | 3251 | 745963 ~ 758953 (+) | True | LOC117598424 |
| XM_026930652.2 | mRNA | upstream | 115169 | 643819 ~ 647035 (+) | True | slc7a6os |
| XM_034308435.1 | mRNA | upstream | 499144 | 201128 ~ 263060 (+) | False | tub |
| XM_034308879.1 | mRNA | downstream | 117 | 790374 ~ 822723 (+) | True | ccdc102a |
| XM_026930339.2 | mRNA | downstream | 62050 | 852307 ~ 894448 (+) | True | dok4 |
| XM_026930340.2 | mRNA | downstream | 62567 | 852824 ~ 894448 (+) | False | dok4 |
| XM_034308551.1 | mRNA | downstream | 105890 | 896147 ~ 908435 (+) | True | dnaaf1 |
| XM_026930496.2 | mRNA | downstream | 122783 | 913040 ~ 930102 (+) | False | cog4 |
| TU205778 | other | upstream | 19494 | 742021 ~ 742710 (+) | True | G173819 |
| TU205686 | other | upstream | 191878 | 568813 ~ 570326 (+) | True | G173748 |
| TU205870 | other | downstream | 571525 | 1361782 ~ 1364931 (+) | True | G173898 |
| TU206587 | other | downstream | 1268713 | 2058970 ~ 2060283 (+) | True | G174536 |
| TU206600 | other | downstream | 1287820 | 2078077 ~ 2078627 (+) | True | G174546 |
| TU207714 | other | downstream | 2857113 | 3647370 ~ 3658276 (+) | False | btbd10b |
| XR_004579071.1 | other | downstream | 3490987 | 4281244 ~ 4297247 (+) | False | nadsyn1 |
