Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU205870 |
| length | 933 |
| RNA type | TUCP |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G173898 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 1361782 ~ 1364931 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU205849 | lncRNA | upstream | 227170 | 1134018 ~ 1134612 (+) | True | G173880 |
| TU205830 | lncRNA | upstream | 336166 | 1024487 ~ 1025616 (+) | True | G173865 |
| TU205819 | lncRNA | upstream | 451465 | 909639 ~ 910317 (+) | True | G173854 |
| TU205786 | lncRNA | upstream | 539099 | 815913 ~ 822683 (+) | False | ccdc102a |
| TU205783 | lncRNA | upstream | 541642 | 764340 ~ 820140 (+) | False | G173823 |
| TU205864 | lncRNA | downstream | 12273 | 1377204 ~ 1432962 (+) | True | G173893 |
| TU206003 | lncRNA | downstream | 253302 | 1618233 ~ 1618745 (+) | True | G174018 |
| TU206008 | lncRNA | downstream | 263913 | 1628844 ~ 1629199 (+) | True | G174023 |
| TU206014 | lncRNA | downstream | 282191 | 1647122 ~ 1649133 (+) | True | G174026 |
| TU206032 | lncRNA | downstream | 321043 | 1685974 ~ 1687078 (+) | True | G174044 |
| XM_034308822.1 | mRNA | upstream | 210026 | 1150781 ~ 1151756 (+) | True | exosc6 |
| XM_034308744.1 | mRNA | upstream | 230792 | 1064081 ~ 1130990 (+) | True | herc1 |
| XM_026930285.2 | mRNA | upstream | 303197 | 1049267 ~ 1058585 (+) | True | fbxo22 |
| XM_026930713.2 | mRNA | upstream | 318695 | 1034560 ~ 1043087 (+) | True | LOC113536635 |
| XM_034308883.1 | mRNA | upstream | 337309 | 1006805 ~ 1024473 (+) | True | LOC113536571 |
| XM_034308642.1 | mRNA | downstream | 293201 | 1658132 ~ 1667262 (+) | True | nucb2a |
| XM_026930319.2 | mRNA | downstream | 380960 | 1745891 ~ 1775046 (+) | True | alx4a |
| XM_026930782.2 | mRNA | downstream | 673637 | 2038568 ~ 2043188 (+) | True | atxn1l |
| XM_026930780.2 | mRNA | downstream | 714409 | 2079340 ~ 2111029 (+) | True | ap1g1 |
| XM_026930781.2 | mRNA | downstream | 714410 | 2079341 ~ 2111029 (+) | False | ap1g1 |
| TU205778 | other | upstream | 619072 | 742021 ~ 742710 (+) | True | G173819 |
| TU205686 | other | upstream | 791456 | 568813 ~ 570326 (+) | True | G173748 |
| TU206587 | other | downstream | 694039 | 2058970 ~ 2060283 (+) | True | G174536 |
| TU206600 | other | downstream | 713146 | 2078077 ~ 2078627 (+) | True | G174546 |
| TU207714 | other | downstream | 2282439 | 3647370 ~ 3658276 (+) | False | btbd10b |
| XR_004579071.1 | other | downstream | 2916313 | 4281244 ~ 4297247 (+) | False | nadsyn1 |
| TU208265 | other | downstream | 3291674 | 4656605 ~ 4661136 (+) | True | G175977 |
