Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU206434 |
| length | 330 |
| lncRNA type | intronic |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G174402 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 1765303 ~ 1765661 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU206032 | lncRNA | upstream | 78225 | 1685974 ~ 1687078 (+) | True | G174044 |
| TU206014 | lncRNA | upstream | 116170 | 1647122 ~ 1649133 (+) | True | G174026 |
| TU206008 | lncRNA | upstream | 136104 | 1628844 ~ 1629199 (+) | True | G174023 |
| TU206003 | lncRNA | upstream | 146558 | 1618233 ~ 1618745 (+) | True | G174018 |
| TU205864 | lncRNA | upstream | 332341 | 1377204 ~ 1432962 (+) | True | G173893 |
| TU206473 | lncRNA | downstream | 137254 | 1902915 ~ 1904826 (+) | True | G174437 |
| TU206518 | lncRNA | downstream | 139872 | 1905533 ~ 1908550 (+) | True | G174474 |
| TU206530 | lncRNA | downstream | 169348 | 1935009 ~ 1935234 (+) | True | G174484 |
| TU206521 | lncRNA | downstream | 171172 | 1936833 ~ 1941900 (+) | True | G174477 |
| TU206525 | lncRNA | downstream | 254156 | 2019817 ~ 2021007 (+) | True | G174479 |
| XM_034308642.1 | mRNA | upstream | 98041 | 1658132 ~ 1667262 (+) | True | nucb2a |
| XM_034308822.1 | mRNA | upstream | 613547 | 1150781 ~ 1151756 (+) | True | exosc6 |
| XM_034308744.1 | mRNA | upstream | 634313 | 1064081 ~ 1130990 (+) | True | herc1 |
| XM_026930285.2 | mRNA | upstream | 706718 | 1049267 ~ 1058585 (+) | True | fbxo22 |
| XM_026930713.2 | mRNA | upstream | 722216 | 1034560 ~ 1043087 (+) | True | LOC113536635 |
| XM_026930782.2 | mRNA | downstream | 272907 | 2038568 ~ 2043188 (+) | True | atxn1l |
| XM_026930780.2 | mRNA | downstream | 313679 | 2079340 ~ 2111029 (+) | True | ap1g1 |
| XM_026930781.2 | mRNA | downstream | 313680 | 2079341 ~ 2111029 (+) | False | ap1g1 |
| XM_026930483.2 | mRNA | downstream | 360125 | 2125786 ~ 2173008 (+) | True | phlpp2 |
| XM_034308654.1 | mRNA | downstream | 418791 | 2184452 ~ 2224366 (+) | False | usp10 |
| TU205870 | other | upstream | 400372 | 1361782 ~ 1364931 (+) | True | G173898 |
| TU205778 | other | upstream | 1022593 | 742021 ~ 742710 (+) | True | G173819 |
| TU205686 | other | upstream | 1194977 | 568813 ~ 570326 (+) | True | G173748 |
| TU206587 | other | downstream | 293309 | 2058970 ~ 2060283 (+) | True | G174536 |
| TU206600 | other | downstream | 312416 | 2078077 ~ 2078627 (+) | True | G174546 |
| TU207714 | other | downstream | 1881709 | 3647370 ~ 3658276 (+) | False | btbd10b |
| XR_004579071.1 | other | downstream | 2515583 | 4281244 ~ 4297247 (+) | False | nadsyn1 |
| TU208265 | other | downstream | 2890944 | 4656605 ~ 4661136 (+) | True | G175977 |
