Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU206525 |
| length | 337 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G174479 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 2019817 ~ 2021007 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU206521 | lncRNA | upstream | 77917 | 1936833 ~ 1941900 (+) | True | G174477 |
| TU206530 | lncRNA | upstream | 84583 | 1935009 ~ 1935234 (+) | True | G174484 |
| TU206518 | lncRNA | upstream | 111267 | 1905533 ~ 1908550 (+) | True | G174474 |
| TU206473 | lncRNA | upstream | 114991 | 1902915 ~ 1904826 (+) | True | G174437 |
| TU206434 | lncRNA | upstream | 254156 | 1765303 ~ 1765661 (+) | True | G174402 |
| TU206579 | lncRNA | downstream | 22983 | 2043990 ~ 2050979 (+) | True | G174529 |
| TU206588 | lncRNA | downstream | 41053 | 2062060 ~ 2062300 (+) | True | G174537 |
| TU206590 | lncRNA | downstream | 42515 | 2063522 ~ 2063732 (+) | True | G174539 |
| TU206593 | lncRNA | downstream | 46591 | 2067598 ~ 2067832 (+) | True | G174542 |
| TU206597 | lncRNA | downstream | 50781 | 2071788 ~ 2072232 (+) | False | G174545 |
| XM_026930319.2 | mRNA | upstream | 244771 | 1745891 ~ 1775046 (+) | True | alx4a |
| XM_034308642.1 | mRNA | upstream | 352555 | 1658132 ~ 1667262 (+) | True | nucb2a |
| XM_034308822.1 | mRNA | upstream | 868061 | 1150781 ~ 1151756 (+) | True | exosc6 |
| XM_034308744.1 | mRNA | upstream | 888827 | 1064081 ~ 1130990 (+) | True | herc1 |
| XM_026930285.2 | mRNA | upstream | 961232 | 1049267 ~ 1058585 (+) | True | fbxo22 |
| XM_026930782.2 | mRNA | downstream | 17561 | 2038568 ~ 2043188 (+) | True | atxn1l |
| XM_026930780.2 | mRNA | downstream | 58333 | 2079340 ~ 2111029 (+) | True | ap1g1 |
| XM_026930781.2 | mRNA | downstream | 58334 | 2079341 ~ 2111029 (+) | False | ap1g1 |
| XM_026930483.2 | mRNA | downstream | 104779 | 2125786 ~ 2173008 (+) | True | phlpp2 |
| XM_034308654.1 | mRNA | downstream | 163445 | 2184452 ~ 2224366 (+) | False | usp10 |
| TU205870 | other | upstream | 654886 | 1361782 ~ 1364931 (+) | True | G173898 |
| TU205778 | other | upstream | 1277107 | 742021 ~ 742710 (+) | True | G173819 |
| TU205686 | other | upstream | 1449491 | 568813 ~ 570326 (+) | True | G173748 |
| TU206587 | other | downstream | 37963 | 2058970 ~ 2060283 (+) | True | G174536 |
| TU206600 | other | downstream | 57070 | 2078077 ~ 2078627 (+) | True | G174546 |
| TU207714 | other | downstream | 1626363 | 3647370 ~ 3658276 (+) | False | btbd10b |
| XR_004579071.1 | other | downstream | 2260237 | 4281244 ~ 4297247 (+) | False | nadsyn1 |
| TU208265 | other | downstream | 2635598 | 4656605 ~ 4661136 (+) | True | G175977 |
