Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU207412 |
| length | 333 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 1 |
| gene id | G175287 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 3219008 ~ 3219340 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU207407 | lncRNA | upstream | 6097 | 3212495 ~ 3212911 (+) | True | G175284 |
| TU207378 | lncRNA | upstream | 20488 | 3164243 ~ 3198520 (+) | True | G175256 |
| TU207386 | lncRNA | upstream | 38454 | 3178782 ~ 3180554 (+) | True | G175263 |
| TU207362 | lncRNA | upstream | 81844 | 3135052 ~ 3137164 (+) | True | G175241 |
| TU206969 | lncRNA | upstream | 214654 | 3000335 ~ 3004354 (+) | True | G174877 |
| TU207417 | lncRNA | downstream | 18544 | 3237884 ~ 3238214 (+) | True | G175291 |
| TU207518 | lncRNA | downstream | 166850 | 3386190 ~ 3386375 (+) | True | G175370 |
| XR_004579094.1 | lncRNA | downstream | 212989 | 3432329 ~ 3434701 (+) | True | LOC117598422 |
| TU207537 | lncRNA | downstream | 228602 | 3447942 ~ 3452820 (+) | True | G175389 |
| TU207662 | lncRNA | downstream | 360638 | 3579978 ~ 3581939 (+) | True | G175493 |
| XM_026930716.2 | mRNA | upstream | 247316 | 2799395 ~ 2971692 (+) | False | LOC113536638 |
| XM_026930803.2 | mRNA | downstream | 7308 | 3226648 ~ 3233940 (+) | True | psmd7 |
| XM_026930336.2 | mRNA | downstream | 34816 | 3254156 ~ 3263298 (+) | True | znf143a |
| XM_034308873.1 | mRNA | downstream | 34816 | 3254156 ~ 3263298 (+) | False | znf143a |
| XM_034308869.1 | mRNA | downstream | 63770 | 3283110 ~ 3352779 (+) | True | LOC113536476 |
| XM_026930488.2 | mRNA | downstream | 345774 | 3565114 ~ 3572263 (+) | False | LOC113536513 |
| TU206600 | other | upstream | 1140381 | 2078077 ~ 2078627 (+) | True | G174546 |
| TU206587 | other | upstream | 1158725 | 2058970 ~ 2060283 (+) | True | G174536 |
| TU205870 | other | upstream | 1854077 | 1361782 ~ 1364931 (+) | True | G173898 |
| TU205778 | other | upstream | 2476298 | 742021 ~ 742710 (+) | True | G173819 |
| TU205686 | other | upstream | 2648682 | 568813 ~ 570326 (+) | True | G173748 |
| TU207714 | other | downstream | 428030 | 3647370 ~ 3658276 (+) | False | btbd10b |
| XR_004579071.1 | other | downstream | 1061904 | 4281244 ~ 4297247 (+) | False | nadsyn1 |
| TU208265 | other | downstream | 1437265 | 4656605 ~ 4661136 (+) | True | G175977 |
| XR_003403680.2 | other | downstream | 3903045 | 7122385 ~ 7131506 (+) | False | LOC113536390 |
| TU209855 | other | downstream | 4048544 | 7267884 ~ 7271320 (+) | False | rpl37a |
