Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU207662 |
| length | 832 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 3 |
| gene id | G175493 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 3579978 ~ 3581939 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU207537 | lncRNA | upstream | 127158 | 3447942 ~ 3452820 (+) | True | G175389 |
| XR_004579094.1 | lncRNA | upstream | 145277 | 3432329 ~ 3434701 (+) | True | LOC117598422 |
| TU207518 | lncRNA | upstream | 193603 | 3386190 ~ 3386375 (+) | True | G175370 |
| TU207417 | lncRNA | upstream | 341764 | 3237884 ~ 3238214 (+) | True | G175291 |
| TU207412 | lncRNA | upstream | 360638 | 3219008 ~ 3219340 (+) | True | G175287 |
| TU207689 | lncRNA | downstream | 23223 | 3605162 ~ 3608844 (+) | True | G175517 |
| TU207699 | lncRNA | downstream | 32252 | 3614191 ~ 3614397 (+) | True | G175527 |
| TU207713 | lncRNA | downstream | 63804 | 3645743 ~ 3646724 (+) | False | pth1b |
| TU207924 | lncRNA | downstream | 428299 | 4010238 ~ 4011233 (+) | True | G175703 |
| TU207982 | lncRNA | downstream | 586248 | 4168187 ~ 4168401 (+) | True | G175744 |
| XM_026930488.2 | mRNA | upstream | 7715 | 3565114 ~ 3572263 (+) | False | LOC113536513 |
| XM_026930487.2 | mRNA | upstream | 7715 | 3565115 ~ 3572263 (+) | True | LOC113536513 |
| XM_026930490.2 | mRNA | upstream | 7715 | 3565152 ~ 3572263 (+) | False | LOC113536513 |
| XM_026930489.2 | mRNA | upstream | 7715 | 3565153 ~ 3572263 (+) | False | LOC113536513 |
| XM_034308869.1 | mRNA | upstream | 227199 | 3283110 ~ 3352779 (+) | True | LOC113536476 |
| XM_026930845.2 | mRNA | downstream | 64039 | 3645978 ~ 3647115 (+) | True | pth1b |
| XM_026930804.2 | mRNA | downstream | 65416 | 3647355 ~ 3658290 (+) | True | btbd10b |
| XM_026930351.2 | mRNA | downstream | 330845 | 3912784 ~ 3922969 (+) | True | dkk3a |
| XM_034308627.1 | mRNA | downstream | 330845 | 3912784 ~ 3922969 (+) | False | dkk3a |
| XM_026930288.2 | mRNA | downstream | 437988 | 4019927 ~ 4039717 (+) | True | pkd1l2a |
| TU206600 | other | upstream | 1501351 | 2078077 ~ 2078627 (+) | True | G174546 |
| TU206587 | other | upstream | 1519695 | 2058970 ~ 2060283 (+) | True | G174536 |
| TU205870 | other | upstream | 2215047 | 1361782 ~ 1364931 (+) | True | G173898 |
| TU205778 | other | upstream | 2837268 | 742021 ~ 742710 (+) | True | G173819 |
| TU205686 | other | upstream | 3009652 | 568813 ~ 570326 (+) | True | G173748 |
| TU207714 | other | downstream | 65431 | 3647370 ~ 3658276 (+) | False | btbd10b |
| XR_004579071.1 | other | downstream | 699305 | 4281244 ~ 4297247 (+) | False | nadsyn1 |
| TU208265 | other | downstream | 1074666 | 4656605 ~ 4661136 (+) | True | G175977 |
| XR_003403680.2 | other | downstream | 3540446 | 7122385 ~ 7131506 (+) | False | LOC113536390 |
| TU209855 | other | downstream | 3685945 | 7267884 ~ 7271320 (+) | False | rpl37a |
