Item | Value |
---|---|
RNA id | TU207689 |
length | 316 |
lncRNA type | inter_gene |
GC content | 0.44 |
exon number | 2 |
gene id | G175517 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047605.1 |
NCBI id | CM018551.1 |
chromosome length | 26640196 |
location | 3605162 ~ 3608844 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU207662 | lncRNA | upstream | 23223 | 3579978 ~ 3581939 (+) | True | G175493 |
TU207537 | lncRNA | upstream | 152342 | 3447942 ~ 3452820 (+) | True | G175389 |
XR_004579094.1 | lncRNA | upstream | 170461 | 3432329 ~ 3434701 (+) | True | LOC117598422 |
TU207518 | lncRNA | upstream | 218787 | 3386190 ~ 3386375 (+) | True | G175370 |
TU207417 | lncRNA | upstream | 366948 | 3237884 ~ 3238214 (+) | True | G175291 |
TU207699 | lncRNA | downstream | 5347 | 3614191 ~ 3614397 (+) | True | G175527 |
TU207713 | lncRNA | downstream | 36899 | 3645743 ~ 3646724 (+) | False | pth1b |
TU207924 | lncRNA | downstream | 401394 | 4010238 ~ 4011233 (+) | True | G175703 |
TU207982 | lncRNA | downstream | 559343 | 4168187 ~ 4168401 (+) | True | G175744 |
TU208084 | lncRNA | downstream | 691261 | 4300105 ~ 4300563 (+) | True | G175827 |
XM_026930488.2 | mRNA | upstream | 32899 | 3565114 ~ 3572263 (+) | False | LOC113536513 |
XM_026930487.2 | mRNA | upstream | 32899 | 3565115 ~ 3572263 (+) | True | LOC113536513 |
XM_026930490.2 | mRNA | upstream | 32899 | 3565152 ~ 3572263 (+) | False | LOC113536513 |
XM_026930489.2 | mRNA | upstream | 32899 | 3565153 ~ 3572263 (+) | False | LOC113536513 |
XM_034308869.1 | mRNA | upstream | 252383 | 3283110 ~ 3352779 (+) | True | LOC113536476 |
XM_026930845.2 | mRNA | downstream | 37134 | 3645978 ~ 3647115 (+) | True | pth1b |
XM_026930804.2 | mRNA | downstream | 38511 | 3647355 ~ 3658290 (+) | True | btbd10b |
XM_026930351.2 | mRNA | downstream | 303940 | 3912784 ~ 3922969 (+) | True | dkk3a |
XM_034308627.1 | mRNA | downstream | 303940 | 3912784 ~ 3922969 (+) | False | dkk3a |
XM_026930288.2 | mRNA | downstream | 411083 | 4019927 ~ 4039717 (+) | True | pkd1l2a |
TU206600 | other | upstream | 1526535 | 2078077 ~ 2078627 (+) | True | G174546 |
TU206587 | other | upstream | 1544879 | 2058970 ~ 2060283 (+) | True | G174536 |
TU205870 | other | upstream | 2240231 | 1361782 ~ 1364931 (+) | True | G173898 |
TU205778 | other | upstream | 2862452 | 742021 ~ 742710 (+) | True | G173819 |
TU205686 | other | upstream | 3034836 | 568813 ~ 570326 (+) | True | G173748 |
TU207714 | other | downstream | 38526 | 3647370 ~ 3658276 (+) | False | btbd10b |
XR_004579071.1 | other | downstream | 672400 | 4281244 ~ 4297247 (+) | False | nadsyn1 |
TU208265 | other | downstream | 1047761 | 4656605 ~ 4661136 (+) | True | G175977 |
XR_003403680.2 | other | downstream | 3513541 | 7122385 ~ 7131506 (+) | False | LOC113536390 |
TU209855 | other | downstream | 3659040 | 7267884 ~ 7271320 (+) | False | rpl37a |