Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU207713 |
| length | 760 |
| lncRNA type | sense_over |
| GC content | 0.41 |
| exon number | 3 |
| gene id | pth1b |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 3645743 ~ 3647115 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU207699 | lncRNA | upstream | 31346 | 3614191 ~ 3614397 (+) | True | G175527 |
| TU207689 | lncRNA | upstream | 36899 | 3605162 ~ 3608844 (+) | True | G175517 |
| TU207662 | lncRNA | upstream | 63804 | 3579978 ~ 3581939 (+) | True | G175493 |
| TU207537 | lncRNA | upstream | 192923 | 3447942 ~ 3452820 (+) | True | G175389 |
| XR_004579094.1 | lncRNA | upstream | 211042 | 3432329 ~ 3434701 (+) | True | LOC117598422 |
| TU207924 | lncRNA | downstream | 363514 | 4010238 ~ 4011233 (+) | True | G175703 |
| TU207982 | lncRNA | downstream | 521463 | 4168187 ~ 4168401 (+) | True | G175744 |
| TU208084 | lncRNA | downstream | 653381 | 4300105 ~ 4300563 (+) | True | G175827 |
| TU208102 | lncRNA | downstream | 721883 | 4368607 ~ 4368810 (+) | True | G175843 |
| TU208155 | lncRNA | downstream | 739061 | 4385785 ~ 4385994 (+) | True | G175894 |
| XM_026930488.2 | mRNA | upstream | 73480 | 3565114 ~ 3572263 (+) | False | LOC113536513 |
| XM_026930487.2 | mRNA | upstream | 73480 | 3565115 ~ 3572263 (+) | True | LOC113536513 |
| XM_026930490.2 | mRNA | upstream | 73480 | 3565152 ~ 3572263 (+) | False | LOC113536513 |
| XM_026930489.2 | mRNA | upstream | 73480 | 3565153 ~ 3572263 (+) | False | LOC113536513 |
| XM_034308869.1 | mRNA | upstream | 292964 | 3283110 ~ 3352779 (+) | True | LOC113536476 |
| XM_026930804.2 | mRNA | downstream | 631 | 3647355 ~ 3658290 (+) | True | btbd10b |
| XM_026930351.2 | mRNA | downstream | 266060 | 3912784 ~ 3922969 (+) | True | dkk3a |
| XM_034308627.1 | mRNA | downstream | 266060 | 3912784 ~ 3922969 (+) | False | dkk3a |
| XM_026930288.2 | mRNA | downstream | 373203 | 4019927 ~ 4039717 (+) | True | pkd1l2a |
| XM_026930874.2 | mRNA | downstream | 419855 | 4066579 ~ 4077728 (+) | False | tmem41b |
| TU206600 | other | upstream | 1567116 | 2078077 ~ 2078627 (+) | True | G174546 |
| TU206587 | other | upstream | 1585460 | 2058970 ~ 2060283 (+) | True | G174536 |
| TU205870 | other | upstream | 2280812 | 1361782 ~ 1364931 (+) | True | G173898 |
| TU205778 | other | upstream | 2903033 | 742021 ~ 742710 (+) | True | G173819 |
| TU205686 | other | upstream | 3075417 | 568813 ~ 570326 (+) | True | G173748 |
| TU207714 | other | downstream | 646 | 3647370 ~ 3658276 (+) | False | btbd10b |
| XR_004579071.1 | other | downstream | 634520 | 4281244 ~ 4297247 (+) | False | nadsyn1 |
| TU208265 | other | downstream | 1009881 | 4656605 ~ 4661136 (+) | True | G175977 |
| XR_003403680.2 | other | downstream | 3475661 | 7122385 ~ 7131506 (+) | False | LOC113536390 |
| TU209855 | other | downstream | 3621160 | 7267884 ~ 7271320 (+) | False | rpl37a |
