Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU207924 |
| length | 601 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G175703 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 4010238 ~ 4011233 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU207713 | lncRNA | upstream | 363514 | 3645743 ~ 3646724 (+) | False | pth1b |
| TU207699 | lncRNA | upstream | 395841 | 3614191 ~ 3614397 (+) | True | G175527 |
| TU207689 | lncRNA | upstream | 401394 | 3605162 ~ 3608844 (+) | True | G175517 |
| TU207662 | lncRNA | upstream | 428299 | 3579978 ~ 3581939 (+) | True | G175493 |
| TU207537 | lncRNA | upstream | 557418 | 3447942 ~ 3452820 (+) | True | G175389 |
| TU207982 | lncRNA | downstream | 156954 | 4168187 ~ 4168401 (+) | True | G175744 |
| TU208084 | lncRNA | downstream | 288872 | 4300105 ~ 4300563 (+) | True | G175827 |
| TU208102 | lncRNA | downstream | 357374 | 4368607 ~ 4368810 (+) | True | G175843 |
| TU208155 | lncRNA | downstream | 374552 | 4385785 ~ 4385994 (+) | True | G175894 |
| TU208168 | lncRNA | downstream | 498183 | 4509416 ~ 4509701 (+) | True | G175905 |
| XM_026930351.2 | mRNA | upstream | 87269 | 3912784 ~ 3922969 (+) | True | dkk3a |
| XM_034308627.1 | mRNA | upstream | 87269 | 3912784 ~ 3922969 (+) | False | dkk3a |
| XM_026930804.2 | mRNA | upstream | 351948 | 3647355 ~ 3658290 (+) | True | btbd10b |
| XM_026930845.2 | mRNA | upstream | 363123 | 3645978 ~ 3647115 (+) | True | pth1b |
| XM_026930488.2 | mRNA | upstream | 437975 | 3565114 ~ 3572263 (+) | False | LOC113536513 |
| XM_026930288.2 | mRNA | downstream | 8694 | 4019927 ~ 4039717 (+) | True | pkd1l2a |
| XM_026930874.2 | mRNA | downstream | 55346 | 4066579 ~ 4077728 (+) | False | tmem41b |
| XM_026930873.2 | mRNA | downstream | 55348 | 4066581 ~ 4077728 (+) | True | tmem41b |
| XM_026930853.2 | mRNA | downstream | 68625 | 4079858 ~ 4128554 (+) | True | dennd5a |
| XM_026930858.2 | mRNA | downstream | 120369 | 4131602 ~ 4137388 (+) | True | sinhcafl |
| TU207714 | other | upstream | 351962 | 3647370 ~ 3658276 (+) | False | btbd10b |
| TU206600 | other | upstream | 1931611 | 2078077 ~ 2078627 (+) | True | G174546 |
| TU206587 | other | upstream | 1949955 | 2058970 ~ 2060283 (+) | True | G174536 |
| TU205870 | other | upstream | 2645307 | 1361782 ~ 1364931 (+) | True | G173898 |
| TU205778 | other | upstream | 3267528 | 742021 ~ 742710 (+) | True | G173819 |
| XR_004579071.1 | other | downstream | 270011 | 4281244 ~ 4297247 (+) | False | nadsyn1 |
| TU208265 | other | downstream | 645372 | 4656605 ~ 4661136 (+) | True | G175977 |
| XR_003403680.2 | other | downstream | 3111152 | 7122385 ~ 7131506 (+) | False | LOC113536390 |
| TU209855 | other | downstream | 3256651 | 7267884 ~ 7271320 (+) | False | rpl37a |
| trnae-cuc_24 | other | downstream | 3590993 | 7602226 ~ 7602297 (+) | True | trnae-cuc_24 |
