Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU208168 |
| length | 286 |
| lncRNA type | inter_gene |
| GC content | 0.27 |
| exon number | 1 |
| gene id | G175905 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 4509416 ~ 4509701 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU208155 | lncRNA | upstream | 123422 | 4385785 ~ 4385994 (+) | True | G175894 |
| TU208102 | lncRNA | upstream | 140606 | 4368607 ~ 4368810 (+) | True | G175843 |
| TU208084 | lncRNA | upstream | 208853 | 4300105 ~ 4300563 (+) | True | G175827 |
| TU207982 | lncRNA | upstream | 341015 | 4168187 ~ 4168401 (+) | True | G175744 |
| TU207924 | lncRNA | upstream | 498183 | 4010238 ~ 4011233 (+) | True | G175703 |
| TU208205 | lncRNA | downstream | 64750 | 4574451 ~ 4574921 (+) | True | G175939 |
| XR_004579122.1 | lncRNA | downstream | 68656 | 4578357 ~ 4583831 (+) | True | LOC117598446 |
| TU208223 | lncRNA | downstream | 134884 | 4644585 ~ 4645018 (+) | False | ano1a |
| TU208224 | lncRNA | downstream | 134884 | 4644585 ~ 4645198 (+) | False | ano1a |
| TU208270 | lncRNA | downstream | 145266 | 4654967 ~ 4665352 (+) | True | G175982 |
| XM_026930325.2 | mRNA | upstream | 18041 | 4486552 ~ 4491375 (+) | True | ccnd1 |
| XM_034308571.1 | mRNA | upstream | 186727 | 4302271 ~ 4322689 (+) | True | tpcn2 |
| XM_034308570.1 | mRNA | upstream | 186727 | 4302272 ~ 4322689 (+) | False | tpcn2 |
| XM_026930415.2 | mRNA | upstream | 186727 | 4302273 ~ 4322689 (+) | False | tpcn2 |
| XM_034308572.1 | mRNA | upstream | 210049 | 4281246 ~ 4299367 (+) | True | nadsyn1 |
| XM_026930514.2 | mRNA | downstream | 103705 | 4613406 ~ 4645023 (+) | True | ano1a |
| XM_026930359.2 | mRNA | downstream | 137696 | 4647397 ~ 4651092 (+) | True | fadd |
| XM_026930608.2 | mRNA | downstream | 182832 | 4692533 ~ 4725750 (+) | True | csnk1g1 |
| XM_026930609.2 | mRNA | downstream | 182832 | 4692533 ~ 4725750 (+) | False | csnk1g1 |
| XM_026930739.2 | mRNA | downstream | 220798 | 4730499 ~ 4736404 (+) | True | rps17 |
| XR_004579071.1 | other | upstream | 212169 | 4281244 ~ 4297247 (+) | False | nadsyn1 |
| TU207714 | other | upstream | 851140 | 3647370 ~ 3658276 (+) | False | btbd10b |
| TU206600 | other | upstream | 2430789 | 2078077 ~ 2078627 (+) | True | G174546 |
| TU206587 | other | upstream | 2449133 | 2058970 ~ 2060283 (+) | True | G174536 |
| TU205870 | other | upstream | 3144485 | 1361782 ~ 1364931 (+) | True | G173898 |
| TU208265 | other | downstream | 146904 | 4656605 ~ 4661136 (+) | True | G175977 |
| XR_003403680.2 | other | downstream | 2612684 | 7122385 ~ 7131506 (+) | False | LOC113536390 |
| TU209855 | other | downstream | 2758183 | 7267884 ~ 7271320 (+) | False | rpl37a |
| trnae-cuc_24 | other | downstream | 3092525 | 7602226 ~ 7602297 (+) | True | trnae-cuc_24 |
| trnar-ucg_6 | other | downstream | 3733721 | 8243422 ~ 8243494 (+) | False | trnar-ucg_6 |
