Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU208802 |
| length | 1171 |
| lncRNA type | read_through |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G176401 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 5471812 ~ 5568100 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU208784 | lncRNA | upstream | 47717 | 5420887 ~ 5424095 (+) | True | G176384 |
| TU208361 | lncRNA | upstream | 511286 | 4912078 ~ 4960526 (+) | False | G176056 |
| TU208360 | lncRNA | upstream | 549758 | 4916775 ~ 4922054 (+) | False | G176056 |
| TU208359 | lncRNA | upstream | 549758 | 4919768 ~ 4922054 (+) | True | G176056 |
| TU208344 | lncRNA | upstream | 578455 | 4893142 ~ 4893357 (+) | True | G176041 |
| TU208838 | lncRNA | downstream | 34556 | 5602656 ~ 5614328 (+) | True | G176430 |
| TU208878 | lncRNA | downstream | 109106 | 5677206 ~ 5690860 (+) | True | G176469 |
| TU209042 | lncRNA | downstream | 246495 | 5814595 ~ 5815106 (+) | True | G176596 |
| TU209054 | lncRNA | downstream | 287425 | 5855525 ~ 5857242 (+) | True | G176608 |
| TU209160 | lncRNA | downstream | 383714 | 5951814 ~ 5952155 (+) | True | G176700 |
| XM_026930821.2 | mRNA | upstream | 64365 | 5399124 ~ 5407447 (+) | True | csnk2a2a |
| XM_026930289.2 | mRNA | upstream | 72911 | 5394017 ~ 5398901 (+) | True | LOC113536403 |
| XM_026930282.2 | mRNA | upstream | 83233 | 5379911 ~ 5388579 (+) | True | si:ch211-146m13.3 |
| XM_026930350.2 | mRNA | upstream | 93921 | 5366861 ~ 5377891 (+) | True | LOC113536448 |
| XM_034308471.1 | mRNA | upstream | 116522 | 5342802 ~ 5355290 (+) | False | drd4b |
| XM_026930579.2 | mRNA | downstream | 140289 | 5708389 ~ 5710341 (+) | True | gemin6 |
| XM_026930675.2 | mRNA | downstream | 195707 | 5763807 ~ 5772916 (+) | False | rfc4 |
| XM_026930676.2 | mRNA | downstream | 195728 | 5763828 ~ 5772916 (+) | True | rfc4 |
| XM_026930669.2 | mRNA | downstream | 220347 | 5788447 ~ 5828396 (+) | True | ankrd13c |
| XM_034308805.1 | mRNA | downstream | 220353 | 5788453 ~ 5827313 (+) | False | ankrd13c |
| TU208265 | other | upstream | 810676 | 4656605 ~ 4661136 (+) | True | G175977 |
| XR_004579071.1 | other | upstream | 1174565 | 4281244 ~ 4297247 (+) | False | nadsyn1 |
| TU207714 | other | upstream | 1813536 | 3647370 ~ 3658276 (+) | False | btbd10b |
| TU206600 | other | upstream | 3393185 | 2078077 ~ 2078627 (+) | True | G174546 |
| TU206587 | other | upstream | 3411529 | 2058970 ~ 2060283 (+) | True | G174536 |
| XR_003403680.2 | other | downstream | 1554285 | 7122385 ~ 7131506 (+) | False | LOC113536390 |
| TU209855 | other | downstream | 1699784 | 7267884 ~ 7271320 (+) | False | rpl37a |
| trnae-cuc_24 | other | downstream | 2034126 | 7602226 ~ 7602297 (+) | True | trnae-cuc_24 |
| trnar-ucg_6 | other | downstream | 2675322 | 8243422 ~ 8243494 (+) | False | trnar-ucg_6 |
| trnar-acg_6 | other | downstream | 2676852 | 8244952 ~ 8245024 (+) | True | trnar-acg_6 |
