Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU209329 |
| length | 310 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G176832 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 6184335 ~ 6188288 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU209304 | lncRNA | downstream | 7981 | 6172198 ~ 6176354 (-) | True | G176816 |
| TU209305 | lncRNA | downstream | 16533 | 6082828 ~ 6167802 (-) | True | G176817 |
| TU208989 | lncRNA | downstream | 469315 | 5631826 ~ 5715020 (-) | True | G176556 |
| TU208744 | lncRNA | downstream | 777236 | 5304614 ~ 5407099 (-) | True | G176354 |
| TU208726 | lncRNA | downstream | 1071067 | 5110114 ~ 5113268 (-) | True | G176336 |
| TU209358 | lncRNA | upstream | 72509 | 6260797 ~ 6261240 (-) | True | G176855 |
| TU209451 | lncRNA | upstream | 169286 | 6357574 ~ 6358087 (-) | True | G176938 |
| TU209473 | lncRNA | upstream | 270078 | 6458366 ~ 6459631 (-) | True | G176959 |
| TU209512 | lncRNA | upstream | 355711 | 6543999 ~ 6545070 (-) | True | G176990 |
| TU209514 | lncRNA | upstream | 362626 | 6550914 ~ 6551262 (-) | True | G176992 |
| XM_026930304.2 | mRNA | downstream | 74963 | 6100029 ~ 6109372 (-) | False | LOC113536415 |
| XM_026930303.2 | mRNA | downstream | 74991 | 6100029 ~ 6109344 (-) | True | LOC113536415 |
| XM_034308409.1 | mRNA | downstream | 89557 | 6085672 ~ 6094778 (-) | False | LOC113536414 |
| XM_034308408.1 | mRNA | downstream | 89574 | 6085672 ~ 6094761 (-) | True | LOC113536414 |
| XM_026930301.2 | mRNA | downstream | 89575 | 6085672 ~ 6094760 (-) | False | LOC113536414 |
| XM_026930590.2 | mRNA | upstream | 38806 | 6227094 ~ 6296876 (-) | True | LOC113536569 |
| XM_026930872.2 | mRNA | upstream | 169849 | 6358137 ~ 6461826 (-) | True | galnt18b |
| XM_034308556.1 | mRNA | upstream | 367431 | 6555719 ~ 6567757 (-) | True | ctr9 |
| XM_034308784.1 | mRNA | upstream | 433616 | 6621904 ~ 6643123 (-) | False | ampd3a |
| XM_034308786.1 | mRNA | upstream | 433616 | 6621904 ~ 6643116 (-) | False | ampd3a |
| TU209010 | other | downstream | 476070 | 5696458 ~ 5708265 (-) | True | LOC113536561 |
| TU209012 | other | downstream | 476070 | 5696458 ~ 5708265 (-) | False | LOC113536561 |
| trnai-uau_2 | other | downstream | 870081 | 5314162 ~ 5314254 (-) | True | trnai-uau_2 |
| trnai-uau_1 | other | downstream | 893741 | 5290502 ~ 5290594 (-) | True | trnai-uau_1 |
| TU208736 | other | downstream | 987517 | 5191964 ~ 5196818 (-) | False | trip4 |
| TU210154 | other | upstream | 1293161 | 7481449 ~ 7483958 (-) | False | si:dkey-56d12.4 |
| XR_004579066.1 | other | upstream | 1392146 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579065.1 | other | upstream | 1392146 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579064.1 | other | upstream | 1392146 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579063.1 | other | upstream | 1392146 | 7580434 ~ 7588815 (-) | True | si:ch1073-365p7.2 |
