Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU209633 |
| length | 204 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G177097 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 6738321 ~ 6738608 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579067.1 | lncRNA | downstream | 149025 | 6579004 ~ 6589296 (-) | False | LOC117598400 |
| XR_004579068.1 | lncRNA | downstream | 149025 | 6580360 ~ 6589296 (-) | True | LOC117598400 |
| TU209513 | lncRNA | downstream | 186739 | 6551325 ~ 6551582 (-) | True | G176991 |
| TU209514 | lncRNA | downstream | 187059 | 6550914 ~ 6551262 (-) | True | G176992 |
| TU209512 | lncRNA | downstream | 193251 | 6543999 ~ 6545070 (-) | True | G176990 |
| TU209925 | lncRNA | upstream | 119931 | 6858539 ~ 6859489 (-) | False | LOC113536608 |
| TU209973 | lncRNA | upstream | 319924 | 7058532 ~ 7059550 (-) | True | G177374 |
| TU210004 | lncRNA | upstream | 399021 | 7137629 ~ 7138904 (-) | True | G177404 |
| XR_004579109.1 | lncRNA | upstream | 417620 | 7156228 ~ 7157621 (-) | True | LOC117598441 |
| TU210062 | lncRNA | upstream | 528953 | 7267561 ~ 7271271 (-) | True | G177448 |
| XM_026930337.2 | mRNA | downstream | 87186 | 6648748 ~ 6651135 (-) | True | adma |
| XM_034308784.1 | mRNA | downstream | 95198 | 6621904 ~ 6643123 (-) | False | ampd3a |
| XM_034308786.1 | mRNA | downstream | 95205 | 6621904 ~ 6643116 (-) | False | ampd3a |
| XM_034308783.1 | mRNA | downstream | 95216 | 6621904 ~ 6643105 (-) | False | ampd3a |
| XM_034308782.1 | mRNA | downstream | 95216 | 6621904 ~ 6643105 (-) | True | ampd3a |
| XM_026930731.2 | mRNA | upstream | 55931 | 6794539 ~ 6807030 (-) | True | swap70a |
| XM_034308534.1 | mRNA | upstream | 71215 | 6809823 ~ 6816713 (-) | True | LOC113536768 |
| XM_026930606.2 | mRNA | upstream | 92640 | 6831248 ~ 6845245 (-) | True | clcn4 |
| XM_026930663.2 | mRNA | upstream | 118147 | 6856755 ~ 6861348 (-) | True | LOC113536608 |
| XM_034308838.1 | mRNA | upstream | 122743 | 6861351 ~ 6886413 (-) | False | shroom2b |
| TU209010 | other | downstream | 1030056 | 5696458 ~ 5708265 (-) | True | LOC113536561 |
| TU209012 | other | downstream | 1030056 | 5696458 ~ 5708265 (-) | False | LOC113536561 |
| trnai-uau_2 | other | downstream | 1424067 | 5314162 ~ 5314254 (-) | True | trnai-uau_2 |
| trnai-uau_1 | other | downstream | 1447727 | 5290502 ~ 5290594 (-) | True | trnai-uau_1 |
| TU208736 | other | downstream | 1541503 | 5191964 ~ 5196818 (-) | False | trip4 |
| TU210154 | other | upstream | 742841 | 7481449 ~ 7483958 (-) | False | si:dkey-56d12.4 |
| XR_004579066.1 | other | upstream | 841826 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579065.1 | other | upstream | 841826 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579064.1 | other | upstream | 841826 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579063.1 | other | upstream | 841826 | 7580434 ~ 7588815 (-) | True | si:ch1073-365p7.2 |
