Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU210074 |
| length | 208 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G177455 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 7289885 ~ 7290092 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU210062 | lncRNA | downstream | 18614 | 7267561 ~ 7271271 (-) | True | G177448 |
| XR_004579109.1 | lncRNA | downstream | 132264 | 7156228 ~ 7157621 (-) | True | LOC117598441 |
| TU210004 | lncRNA | downstream | 150981 | 7137629 ~ 7138904 (-) | True | G177404 |
| TU209973 | lncRNA | downstream | 230335 | 7058532 ~ 7059550 (-) | True | G177374 |
| TU209925 | lncRNA | downstream | 430396 | 6858539 ~ 6859489 (-) | False | LOC113536608 |
| TU210078 | lncRNA | upstream | 2825 | 7292917 ~ 7293170 (-) | True | G177459 |
| TU210088 | lncRNA | upstream | 84935 | 7375027 ~ 7375235 (-) | True | G177469 |
| TU210110 | lncRNA | upstream | 123875 | 7413967 ~ 7414185 (-) | True | G177491 |
| XR_003403681.2 | lncRNA | upstream | 125849 | 7415941 ~ 7417038 (-) | True | LOC113536470 |
| TU210159 | lncRNA | upstream | 132931 | 7423023 ~ 7423276 (-) | True | G177539 |
| XM_026930841.2 | mRNA | downstream | 37292 | 7248348 ~ 7252593 (-) | True | cfap410 |
| XM_026930817.2 | mRNA | downstream | 87021 | 7192255 ~ 7202864 (-) | False | si:dkey-93h22.8 |
| XM_026930816.2 | mRNA | downstream | 87021 | 7192255 ~ 7202864 (-) | True | si:dkey-93h22.8 |
| XM_034308948.1 | mRNA | downstream | 99059 | 7180208 ~ 7190826 (-) | False | ogal |
| XM_034308645.1 | mRNA | upstream | 6615 | 7296707 ~ 7354330 (-) | True | strn |
| XM_026930513.2 | mRNA | upstream | 6615 | 7296707 ~ 7354052 (-) | False | strn |
| XM_026930318.2 | mRNA | upstream | 144227 | 7434319 ~ 7437490 (-) | True | irf2bp2b |
| XM_026930317.2 | mRNA | upstream | 190330 | 7480422 ~ 7484117 (-) | True | si:dkey-56d12.4 |
| XM_026930575.2 | mRNA | upstream | 202409 | 7492501 ~ 7500900 (-) | True | rbm34 |
| TU209010 | other | downstream | 1581620 | 5696458 ~ 5708265 (-) | True | LOC113536561 |
| TU209012 | other | downstream | 1581620 | 5696458 ~ 5708265 (-) | False | LOC113536561 |
| trnai-uau_2 | other | downstream | 1975631 | 5314162 ~ 5314254 (-) | True | trnai-uau_2 |
| trnai-uau_1 | other | downstream | 1999291 | 5290502 ~ 5290594 (-) | True | trnai-uau_1 |
| TU208736 | other | downstream | 2093067 | 5191964 ~ 5196818 (-) | False | trip4 |
| TU210154 | other | upstream | 191357 | 7481449 ~ 7483958 (-) | False | si:dkey-56d12.4 |
| XR_004579066.1 | other | upstream | 290342 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579065.1 | other | upstream | 290342 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579064.1 | other | upstream | 290342 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579063.1 | other | upstream | 290342 | 7580434 ~ 7588815 (-) | True | si:ch1073-365p7.2 |
