Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU210110 |
| length | 219 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G177491 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 7413967 ~ 7414185 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU210088 | lncRNA | downstream | 38732 | 7375027 ~ 7375235 (-) | True | G177469 |
| TU210078 | lncRNA | downstream | 120797 | 7292917 ~ 7293170 (-) | True | G177459 |
| TU210074 | lncRNA | downstream | 123875 | 7289885 ~ 7290092 (-) | True | G177455 |
| TU210062 | lncRNA | downstream | 142696 | 7267561 ~ 7271271 (-) | True | G177448 |
| XR_004579109.1 | lncRNA | downstream | 256346 | 7156228 ~ 7157621 (-) | True | LOC117598441 |
| XR_003403681.2 | lncRNA | upstream | 1756 | 7415941 ~ 7417038 (-) | True | LOC113536470 |
| TU210159 | lncRNA | upstream | 8838 | 7423023 ~ 7423276 (-) | True | G177539 |
| TU210167 | lncRNA | upstream | 25994 | 7440179 ~ 7440388 (-) | True | G177547 |
| TU210170 | lncRNA | upstream | 27706 | 7441891 ~ 7442395 (-) | True | G177550 |
| TU210179 | lncRNA | upstream | 56789 | 7470974 ~ 7471210 (-) | True | G177559 |
| XM_034308645.1 | mRNA | downstream | 59637 | 7296707 ~ 7354330 (-) | True | strn |
| XM_026930513.2 | mRNA | downstream | 59915 | 7296707 ~ 7354052 (-) | False | strn |
| XM_026930841.2 | mRNA | downstream | 161374 | 7248348 ~ 7252593 (-) | True | cfap410 |
| XM_026930817.2 | mRNA | downstream | 211103 | 7192255 ~ 7202864 (-) | False | si:dkey-93h22.8 |
| XM_026930816.2 | mRNA | downstream | 211103 | 7192255 ~ 7202864 (-) | True | si:dkey-93h22.8 |
| XM_026930318.2 | mRNA | upstream | 20134 | 7434319 ~ 7437490 (-) | True | irf2bp2b |
| XM_026930317.2 | mRNA | upstream | 66237 | 7480422 ~ 7484117 (-) | True | si:dkey-56d12.4 |
| XM_026930575.2 | mRNA | upstream | 78316 | 7492501 ~ 7500900 (-) | True | rbm34 |
| XM_034308740.1 | mRNA | upstream | 101062 | 7515247 ~ 7547820 (-) | True | nid1a |
| XM_026930582.2 | mRNA | upstream | 150195 | 7564380 ~ 7577840 (-) | False | ero1b |
| TU209010 | other | downstream | 1705702 | 5696458 ~ 5708265 (-) | True | LOC113536561 |
| TU209012 | other | downstream | 1705702 | 5696458 ~ 5708265 (-) | False | LOC113536561 |
| trnai-uau_2 | other | downstream | 2099713 | 5314162 ~ 5314254 (-) | True | trnai-uau_2 |
| trnai-uau_1 | other | downstream | 2123373 | 5290502 ~ 5290594 (-) | True | trnai-uau_1 |
| TU208736 | other | downstream | 2217149 | 5191964 ~ 5196818 (-) | False | trip4 |
| TU210154 | other | upstream | 67264 | 7481449 ~ 7483958 (-) | False | si:dkey-56d12.4 |
| XR_004579066.1 | other | upstream | 166249 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579065.1 | other | upstream | 166249 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579064.1 | other | upstream | 166249 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579063.1 | other | upstream | 166249 | 7580434 ~ 7588815 (-) | True | si:ch1073-365p7.2 |
