Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU210139 |
| length | 220 |
| lncRNA type | inter_gene |
| GC content | 0.28 |
| exon number | 1 |
| gene id | G177520 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 7458538 ~ 7458757 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU210137 | lncRNA | upstream | 1933 | 7455553 ~ 7456605 (+) | True | G177518 |
| TU210136 | lncRNA | upstream | 3068 | 7455242 ~ 7455470 (+) | True | G177517 |
| TU210132 | lncRNA | upstream | 8861 | 7449476 ~ 7449677 (+) | True | G177513 |
| XR_004579110.1 | lncRNA | upstream | 13251 | 7443017 ~ 7445287 (+) | True | LOC117598442 |
| TU210125 | lncRNA | upstream | 16818 | 7441236 ~ 7441720 (+) | True | G177506 |
| TU210207 | lncRNA | downstream | 56059 | 7514816 ~ 7516891 (+) | True | G177580 |
| TU210222 | lncRNA | downstream | 88609 | 7547366 ~ 7547831 (+) | True | G177594 |
| TU210274 | lncRNA | downstream | 214759 | 7673516 ~ 7674470 (+) | True | G177630 |
| TU210272 | lncRNA | downstream | 217108 | 7675865 ~ 7676699 (+) | True | G177628 |
| TU210419 | lncRNA | downstream | 357306 | 7816063 ~ 7816610 (+) | True | G177751 |
| XM_026930387.2 | mRNA | upstream | 96608 | 7356919 ~ 7361930 (+) | True | map1lc3c |
| XM_026930801.2 | mRNA | upstream | 169021 | 7282097 ~ 7289517 (+) | True | opn6a |
| XM_026930879.2 | mRNA | upstream | 179156 | 7272843 ~ 7279382 (+) | True | eif4a3 |
| XM_026930353.2 | mRNA | upstream | 187267 | 7267831 ~ 7271271 (+) | True | rpl37a |
| XM_026930725.2 | mRNA | upstream | 192209 | 7253361 ~ 7266329 (+) | True | pfklb |
| XM_026930576.2 | mRNA | downstream | 25486 | 7484243 ~ 7492243 (+) | True | tomm20b |
| XM_026930574.2 | mRNA | downstream | 42321 | 7501078 ~ 7513789 (+) | True | tbce |
| XM_026930639.2 | mRNA | downstream | 94216 | 7552973 ~ 7561495 (+) | True | gpr137bb |
| XM_026930291.2 | mRNA | downstream | 322904 | 7781661 ~ 7794628 (+) | True | si:ch211-106j24.1 |
| XM_026930745.2 | mRNA | downstream | 385916 | 7844673 ~ 7925739 (+) | True | LOC113536658 |
| TU209855 | other | upstream | 187218 | 7267884 ~ 7271320 (+) | False | rpl37a |
| XR_003403680.2 | other | upstream | 327032 | 7122385 ~ 7131506 (+) | False | LOC113536390 |
| TU208265 | other | upstream | 2797402 | 4656605 ~ 4661136 (+) | True | G175977 |
| XR_004579071.1 | other | upstream | 3161291 | 4281244 ~ 4297247 (+) | False | nadsyn1 |
| TU207714 | other | upstream | 3800262 | 3647370 ~ 3658276 (+) | False | btbd10b |
| trnae-cuc_24 | other | downstream | 143469 | 7602226 ~ 7602297 (+) | True | trnae-cuc_24 |
| trnar-ucg_6 | other | downstream | 784665 | 8243422 ~ 8243494 (+) | False | trnar-ucg_6 |
| trnar-acg_6 | other | downstream | 786195 | 8244952 ~ 8245024 (+) | True | trnar-acg_6 |
| trnar-ucg_8 | other | downstream | 789259 | 8248016 ~ 8248088 (+) | True | trnar-ucg_8 |
| TU210703 | other | downstream | 794664 | 8253421 ~ 8270749 (+) | True | LOC113536578 |
