Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU210154 |
| length | 780 |
| RNA type | TUCP |
| GC content | 0.47 |
| exon number | 2 |
| gene id | si:dkey-56d12.4 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 7480422 ~ 7484117 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU210182 | lncRNA | downstream | 2061 | 7479158 ~ 7479388 (-) | True | G177562 |
| TU210179 | lncRNA | downstream | 10239 | 7470974 ~ 7471210 (-) | True | G177559 |
| TU210170 | lncRNA | downstream | 39054 | 7441891 ~ 7442395 (-) | True | G177550 |
| TU210167 | lncRNA | downstream | 41061 | 7440179 ~ 7440388 (-) | True | G177547 |
| TU210159 | lncRNA | downstream | 58173 | 7423023 ~ 7423276 (-) | True | G177539 |
| TU210337 | lncRNA | upstream | 24893 | 7508851 ~ 7509188 (-) | True | G177682 |
| TU210347 | lncRNA | upstream | 67564 | 7551522 ~ 7551750 (-) | True | G177691 |
| TU210367 | lncRNA | upstream | 191958 | 7675916 ~ 7676670 (-) | False | igf1rb |
| TU210390 | lncRNA | upstream | 223553 | 7707511 ~ 7755018 (-) | True | G177729 |
| TU210396 | lncRNA | upstream | 244955 | 7728913 ~ 7750806 (-) | True | G177733 |
| XM_026930318.2 | mRNA | downstream | 43959 | 7434319 ~ 7437490 (-) | True | irf2bp2b |
| XM_034308645.1 | mRNA | downstream | 127119 | 7296707 ~ 7354330 (-) | True | strn |
| XM_026930513.2 | mRNA | downstream | 127397 | 7296707 ~ 7354052 (-) | False | strn |
| XM_026930841.2 | mRNA | downstream | 228856 | 7248348 ~ 7252593 (-) | True | cfap410 |
| XM_026930817.2 | mRNA | downstream | 278585 | 7192255 ~ 7202864 (-) | False | si:dkey-93h22.8 |
| XM_026930575.2 | mRNA | upstream | 8543 | 7492501 ~ 7500900 (-) | True | rbm34 |
| XM_034308740.1 | mRNA | upstream | 31289 | 7515247 ~ 7547820 (-) | True | nid1a |
| XM_026930582.2 | mRNA | upstream | 80422 | 7564380 ~ 7577840 (-) | False | ero1b |
| XM_026930583.2 | mRNA | upstream | 80422 | 7564380 ~ 7576849 (-) | True | ero1b |
| XM_034308540.1 | mRNA | upstream | 96476 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| TU209010 | other | downstream | 1773184 | 5696458 ~ 5708265 (-) | True | LOC113536561 |
| TU209012 | other | downstream | 1773184 | 5696458 ~ 5708265 (-) | False | LOC113536561 |
| trnai-uau_2 | other | downstream | 2167195 | 5314162 ~ 5314254 (-) | True | trnai-uau_2 |
| trnai-uau_1 | other | downstream | 2190855 | 5290502 ~ 5290594 (-) | True | trnai-uau_1 |
| TU208736 | other | downstream | 2284631 | 5191964 ~ 5196818 (-) | False | trip4 |
| XR_004579066.1 | other | upstream | 96476 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579065.1 | other | upstream | 96476 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579064.1 | other | upstream | 96476 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579063.1 | other | upstream | 96476 | 7580434 ~ 7588815 (-) | True | si:ch1073-365p7.2 |
| trnar-acg_4 | other | upstream | 758148 | 8242106 ~ 8242178 (-) | True | trnar-acg_4 |
