Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026930589.2 |
| length | 8847 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 21 |
| gene id | igf1rb |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 7675916 ~ 7764430 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0021522 | spinal cord motor neuron differentiation | biological_process |
| GO:0018108 | peptidyl-tyrosine phosphorylation | biological_process |
| GO:0048752 | semicircular canal morphogenesis | biological_process |
| GO:0031076 | embryonic camera-type eye development | biological_process |
| GO:0048009 | insulin-like growth factor receptor signaling pathway | biological_process |
| GO:0031101 | fin regeneration | biological_process |
| GO:0043154 | negative regulation of cysteine-type endopeptidase activity involved in apoptotic process | biological_process |
| GO:0003007 | heart morphogenesis | biological_process |
| GO:0008354 | germ cell migration | biological_process |
| GO:0046777 | protein autophosphorylation | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0043548 | phosphatidylinositol 3-kinase binding | molecular_function |
| GO:0043560 | insulin receptor substrate binding | molecular_function |
| GO:0005520 | insulin-like growth factor binding | molecular_function |
| GO:0043027 | cysteine-type endopeptidase inhibitor activity involved in apoptotic process | molecular_function |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004714 | transmembrane receptor protein tyrosine kinase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU210347 | lncRNA | downstream | 124371 | 7551522 ~ 7551750 (-) | True | G177691 |
| TU210337 | lncRNA | downstream | 166933 | 7508851 ~ 7509188 (-) | True | G177682 |
| TU210182 | lncRNA | downstream | 196733 | 7479158 ~ 7479388 (-) | True | G177562 |
| TU210179 | lncRNA | downstream | 204911 | 7470974 ~ 7471210 (-) | True | G177559 |
| TU210170 | lncRNA | downstream | 233726 | 7441891 ~ 7442395 (-) | True | G177550 |
| TU210491 | lncRNA | upstream | 161892 | 7926293 ~ 7927058 (-) | True | G177807 |
| XR_003403692.2 | lncRNA | upstream | 506706 | 8271107 ~ 8275360 (-) | True | LOC113536653 |
| TU210754 | lncRNA | upstream | 559218 | 8323619 ~ 8324164 (-) | True | G178057 |
| TU210939 | lncRNA | upstream | 757400 | 8521801 ~ 8522085 (-) | True | G178208 |
| TU210961 | lncRNA | upstream | 828785 | 8593186 ~ 8593405 (-) | True | G178227 |
| XM_026930275.2 | mRNA | downstream | 4460 | 7659046 ~ 7671661 (-) | False | lrrc28 |
| XM_034308415.1 | mRNA | downstream | 4544 | 7659046 ~ 7671577 (-) | False | lrrc28 |
| XM_026930278.2 | mRNA | downstream | 4719 | 7659046 ~ 7671402 (-) | True | lrrc28 |
| XM_026930277.2 | mRNA | downstream | 6092 | 7659046 ~ 7670029 (-) | False | lrrc28 |
| XM_026930306.2 | mRNA | downstream | 19167 | 7625496 ~ 7656954 (-) | False | LOC113536417 |
| XM_026930905.2 | mRNA | upstream | 35264 | 7799665 ~ 7801552 (-) | True | mespaa |
| XM_026930903.2 | mRNA | upstream | 44989 | 7809390 ~ 7810679 (-) | True | mespba |
| XM_034308973.1 | mRNA | upstream | 53835 | 7818236 ~ 7845027 (-) | False | sv2ba |
| XM_034308972.1 | mRNA | upstream | 53835 | 7818236 ~ 7845026 (-) | True | sv2ba |
| XM_026930641.2 | mRNA | upstream | 53835 | 7818236 ~ 7837408 (-) | False | sv2ba |
| XR_004579066.1 | other | downstream | 87306 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579065.1 | other | downstream | 87306 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579064.1 | other | downstream | 87306 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579063.1 | other | downstream | 87306 | 7580434 ~ 7588815 (-) | True | si:ch1073-365p7.2 |
| TU210154 | other | downstream | 192163 | 7481449 ~ 7483958 (-) | False | si:dkey-56d12.4 |
| trnar-acg_4 | other | upstream | 477705 | 8242106 ~ 8242178 (-) | True | trnar-acg_4 |
| trnar-acg_5 | other | upstream | 478330 | 8242731 ~ 8242803 (-) | True | trnar-acg_5 |
| trnar-ucg_7 | other | upstream | 480248 | 8244649 ~ 8244721 (-) | True | trnar-ucg_7 |
| trnar-acg_7 | other | upstream | 482302 | 8246703 ~ 8246775 (-) | True | trnar-acg_7 |
| trnar-acg_8 | other | upstream | 483289 | 8247690 ~ 8247762 (-) | True | trnar-acg_8 |
