Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU210390 |
| length | 423 |
| lncRNA type | sense_over |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G177729 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 7707511 ~ 7755018 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU210367 | lncRNA | downstream | 30841 | 7675916 ~ 7676670 (-) | False | igf1rb |
| TU210347 | lncRNA | downstream | 155761 | 7551522 ~ 7551750 (-) | True | G177691 |
| TU210337 | lncRNA | downstream | 198323 | 7508851 ~ 7509188 (-) | True | G177682 |
| TU210182 | lncRNA | downstream | 228123 | 7479158 ~ 7479388 (-) | True | G177562 |
| TU210179 | lncRNA | downstream | 236301 | 7470974 ~ 7471210 (-) | True | G177559 |
| TU210491 | lncRNA | upstream | 171275 | 7926293 ~ 7927058 (-) | True | G177807 |
| XR_003403692.2 | lncRNA | upstream | 516089 | 8271107 ~ 8275360 (-) | True | LOC113536653 |
| TU210754 | lncRNA | upstream | 568601 | 8323619 ~ 8324164 (-) | True | G178057 |
| TU210939 | lncRNA | upstream | 766783 | 8521801 ~ 8522085 (-) | True | G178208 |
| TU210961 | lncRNA | upstream | 838168 | 8593186 ~ 8593405 (-) | True | G178227 |
| XM_026930275.2 | mRNA | downstream | 35850 | 7659046 ~ 7671661 (-) | False | lrrc28 |
| XM_034308415.1 | mRNA | downstream | 35934 | 7659046 ~ 7671577 (-) | False | lrrc28 |
| XM_026930278.2 | mRNA | downstream | 36109 | 7659046 ~ 7671402 (-) | True | lrrc28 |
| XM_026930277.2 | mRNA | downstream | 37482 | 7659046 ~ 7670029 (-) | False | lrrc28 |
| XM_026930306.2 | mRNA | downstream | 50557 | 7625496 ~ 7656954 (-) | False | LOC113536417 |
| XM_026930905.2 | mRNA | upstream | 44647 | 7799665 ~ 7801552 (-) | True | mespaa |
| XM_026930903.2 | mRNA | upstream | 54372 | 7809390 ~ 7810679 (-) | True | mespba |
| XM_034308973.1 | mRNA | upstream | 63218 | 7818236 ~ 7845027 (-) | False | sv2ba |
| XM_034308972.1 | mRNA | upstream | 63218 | 7818236 ~ 7845026 (-) | True | sv2ba |
| XM_026930641.2 | mRNA | upstream | 63218 | 7818236 ~ 7837408 (-) | False | sv2ba |
| XR_004579066.1 | other | downstream | 118696 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579065.1 | other | downstream | 118696 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579064.1 | other | downstream | 118696 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579063.1 | other | downstream | 118696 | 7580434 ~ 7588815 (-) | True | si:ch1073-365p7.2 |
| TU210154 | other | downstream | 223553 | 7481449 ~ 7483958 (-) | False | si:dkey-56d12.4 |
| trnar-acg_4 | other | upstream | 487088 | 8242106 ~ 8242178 (-) | True | trnar-acg_4 |
| trnar-acg_5 | other | upstream | 487713 | 8242731 ~ 8242803 (-) | True | trnar-acg_5 |
| trnar-ucg_7 | other | upstream | 489631 | 8244649 ~ 8244721 (-) | True | trnar-ucg_7 |
| trnar-acg_7 | other | upstream | 491685 | 8246703 ~ 8246775 (-) | True | trnar-acg_7 |
| trnar-acg_8 | other | upstream | 492672 | 8247690 ~ 8247762 (-) | True | trnar-acg_8 |
