Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU210939 |
| length | 285 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G178208 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 8521801 ~ 8522085 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU210754 | lncRNA | downstream | 197637 | 8323619 ~ 8324164 (-) | True | G178057 |
| XR_003403692.2 | lncRNA | downstream | 246441 | 8271107 ~ 8275360 (-) | True | LOC113536653 |
| TU210491 | lncRNA | downstream | 594743 | 7926293 ~ 7927058 (-) | True | G177807 |
| TU210390 | lncRNA | downstream | 766783 | 7707511 ~ 7755018 (-) | True | G177729 |
| TU210396 | lncRNA | downstream | 770995 | 7728913 ~ 7750806 (-) | True | G177733 |
| TU210961 | lncRNA | upstream | 71101 | 8593186 ~ 8593405 (-) | True | G178227 |
| TU211159 | lncRNA | upstream | 189092 | 8711177 ~ 8712118 (-) | True | G178398 |
| TU211259 | lncRNA | upstream | 461133 | 8983218 ~ 8984148 (-) | False | asb7 |
| TU211271 | lncRNA | upstream | 481559 | 9003644 ~ 9003852 (-) | True | G178501 |
| TU211458 | lncRNA | upstream | 664986 | 9187071 ~ 9189914 (-) | True | G178673 |
| XM_026930543.2 | mRNA | downstream | 13471 | 8491252 ~ 8508330 (-) | True | abhd2a |
| XM_026930902.2 | mRNA | downstream | 52369 | 8453004 ~ 8469432 (-) | True | LOC113536763 |
| XM_026930322.2 | mRNA | downstream | 70549 | 8373495 ~ 8451252 (-) | True | furina |
| XM_026930584.2 | mRNA | downstream | 154814 | 8330088 ~ 8366987 (-) | False | fes |
| XM_026930585.2 | mRNA | downstream | 154814 | 8330088 ~ 8366987 (-) | True | fes |
| XM_026930815.2 | mRNA | upstream | 523 | 8522608 ~ 8529443 (-) | True | rasl12 |
| XM_026930901.2 | mRNA | upstream | 12883 | 8534968 ~ 8543975 (-) | True | ubap1lb |
| XM_026930326.2 | mRNA | upstream | 22857 | 8544942 ~ 8549611 (-) | True | pdcd7 |
| XM_026930548.2 | mRNA | upstream | 28283 | 8550368 ~ 8564908 (-) | False | clpxa |
| XM_026930546.2 | mRNA | upstream | 28283 | 8550368 ~ 8564907 (-) | True | clpxa |
| trnar-acg_8 | other | downstream | 274039 | 8247690 ~ 8247762 (-) | True | trnar-acg_8 |
| trnar-acg_7 | other | downstream | 275026 | 8246703 ~ 8246775 (-) | True | trnar-acg_7 |
| trnar-ucg_7 | other | downstream | 277080 | 8244649 ~ 8244721 (-) | True | trnar-ucg_7 |
| trnar-acg_5 | other | downstream | 278998 | 8242731 ~ 8242803 (-) | True | trnar-acg_5 |
| trnar-acg_4 | other | downstream | 279623 | 8242106 ~ 8242178 (-) | True | trnar-acg_4 |
| trnae-uuc_3 | other | upstream | 368542 | 8890627 ~ 8890698 (-) | True | trnae-uuc_3 |
| TU211757 | other | upstream | 1000331 | 9522416 ~ 9523330 (-) | True | G178942 |
| TU211855 | other | upstream | 1291807 | 9813892 ~ 9815225 (-) | True | G179035 |
| TU212647 | other | upstream | 2721890 | 11243975 ~ 11246305 (-) | False | nppc |
| TU212749 | other | upstream | 2887007 | 11409092 ~ 11415440 (-) | False | G179803 |
